Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00250 ATGGAAGAGGAAGAGGATCAATTCTACGAAACTCGTGAGGAATTGTGTTCTGTGTCTGATGGGGGTTCGGATTGTTCTGAATCAGATGAATCTAGTTCTGGTAATAACGGACATGTTACTAGGTACCAGGTTTGGGCACAAAACCTTGAAAGTGTTCACCAGAGACGCCTCAATTTCCTGAGATGGATGGGTTTGGAGTCTGATTTGAATTATTCAATGAAGGGGGAGGAGTTGGGAGATCAACCTTGTGGGATTGACCGAATCACTGCAACAAGTGGGGCAGTGCTGAGAACTTCTTTTGCTATTGAGGAGGGTCTTCCCTCAACCTCAAACCAGATTGTGTTGGATTCCTTGTCTGATGAGGCCTCCGGCTCGCAAGAAAATCGTGAAAATTTGGCGTGTATGATAAGGAATTTGGATGATGGAACGGAGTATATTGTGGATAAGCTGGGTCAGGATGGAGCTCCTAGCACACTGCGTGTTTTGGGTTCGAACCAATTGATTAGCTTAGAGGAGTTTCAGAAAAATATTGGGCCATCGTCGTTCATTCGCAGACATTTGCAGAGAGACACTGAAAACACAAGGTTGTTGGGAGTTGGGAAAAGGAAAATGAAGAGGGGTTGGCTAAGGAAACTGGATTCTATTGCTTGTTTTGTTCATAATCATGGGTTTGATGAAACTAAATGCAAAGACTGTGATTCAGTGGATAGGAGTGGGATACAAAGAGTTCGAGTTCATTCGTATAGGAAGCGGTTTAAGGAGCTTTCCTCCCTTTACACCGAACAGGAGTTTAAAGCACATAAAGGTGTTATTTTGACAATGAAGTTCAGTCTTGATGGAAAATATCTGGCTAGTGGTGGTGAAGATGGTATGGTACGTGTGTGGAAGGTGATTGAGGATGAGAGATCAAGTGAATTGGACATTCTGGACAATGATCCGTCAAATATATATTTCAAAATAAATAATTTTTCATGCGTTGCTCCCCTTGATGTAGATAAAGAGAAGTTAGTTAAAACAGAGAAGTTGAGGAGATCATCTGAAGCAACCTGTGTGATTGTCCCACCAAAGACCTTCCGCATATCAGCAAAACCTTTGCATGAGTTCCAAGGGCACAGTAGTGACATTATAGACCTTGCTTGGTCCAAAAGAGGGTTTCTACTGTCATCCTCTGTTGATAAGACAGTGCGCCTATGGCATGTAGGAATCGACAGATGTCTTAGAGTTTTCTACCACAATAATTATGTTACATGTGTCAATTTCAATCCTGTCAATGATAATTTTTTCATCAGTGGTTCAATTGATGGAAAAGTGCGCATATGGGAAGTTGTTCACTGTAGGGTTAGTGATTACATTGATATCAGAGAGATAGTCACAGCTGTGTGCTTCCGCCCTGATGGAAAGGGCACAATTGTGGGTACCATGGCAGGCAATTGCCGTTTCTATGATATCGTAGATAATCATCTGCAATTGGATGCTCAGTTGTGTTTACGAGGCAAAAAGAAGACATCAGGGAAAAAGATCACTGGCTTTCAGTTTTCACCTAGTGACCCAAGCAAACTATTGGTTGCTTCTGCTGATTCACATGTCTGTATACTTTCTGGAGTTGATGTAATCTACAAATTCAAGGGTCTAAGAAGTGCAGGTCAAATGCATGCTTCATTCACCACCGACGGGAAACATATCATCTCAGTTAGCGAGGATTCAAATGTATGTATATGGAATTACACTGGCCAAGATAGAAATACCTCCAAAGCAAAGAAAATTTGGTCTTCAGAGAGTTTTCTCTCCCACAACGCAGCCATCGCTGTACCTTGGTGTGGCATTGAATCAATGCCAGGAACACTCTTATCCCCATCGCTAGGAGAGGATGTAAATCAGAGGTGTTCTCTGCCTTCTCCTGATTGCTTCTTCTTGAGTCGCGGATTTCTGTCTGAGTTGATCCCAAAGGTTTCTGCAACATGGCCCGAGGAGACTCTTGTGGACTCATCGTGTCAAACTCAAACTGTTGTTTCTCCTACAATGTGTAAATCAGAGTACAAATTCTTGAGAAGTGCTTGCAAGGGAATGTCTAATTCTCACTTGTGGGGCCAAGTAATTGTGACAGCAGGATGGGATGGATACATAAGAGTGTACCAGAATTATGGATTACCCGTTCGTGGCTGA 2163 0.4258 MEEEEDQFYETREELCSVSDGGSDCSESDESSSGNNGHVTRYQVWAQNLESVHQRRLNFLRWMGLESDLNYSMKGEELGDQPCGIDRITATSGAVLRTSFAIEEGLPSTSNQIVLDSLSDEASGSQENRENLACMIRNLDDGTEYIVDKLGQDGAPSTLRVLGSNQLISLEEFQKNIGPSSFIRRHLQRDTENTRLLGVGKRKMKRGWLRKLDSIACFVHNHGFDETKCKDCDSVDRSGIQRVRVHSYRKRFKELSSLYTEQEFKAHKGVILTMKFSLDGKYLASGGEDGMVRVWKVIEDERSSELDILDNDPSNIYFKINNFSCVAPLDVDKEKLVKTEKLRRSSEATCVIVPPKTFRISAKPLHEFQGHSSDIIDLAWSKRGFLLSSSVDKTVRLWHVGIDRCLRVFYHNNYVTCVNFNPVNDNFFISGSIDGKVRIWEVVHCRVSDYIDIREIVTAVCFRPDGKGTIVGTMAGNCRFYDIVDNHLQLDAQLCLRGKKKTSGKKITGFQFSPSDPSKLLVASADSHVCILSGVDVIYKFKGLRSAGQMHASFTTDGKHIISVSEDSNVCIWNYTGQDRNTSKAKKIWSSESFLSHNAAIAVPWCGIESMPGTLLSPSLGEDVNQRCSLPSPDCFFLSRGFLSELIPKVSATWPEETLVDSSCQTQTVVSPTMCKSEYKFLRSACKGMSNSHLWGQVIVTAGWDGYIRVYQNYGLPVRG 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00250 720 ProSiteProfiles Trp-Asp (WD) repeats profile. 408 442 IPR001680 GO:0005515
Gma08g00250 720 Gene3D - 253 493 IPR015943 GO:0005515
Gma08g00250 720 SUPERFAMILY WD40 repeat-like 258 711 IPR036322 GO:0005515
Gma08g00250 720 PRINTS G protein beta WD-40 repeat signature 283 297 IPR020472 -
Gma08g00250 720 PRINTS G protein beta WD-40 repeat signature 386 400 IPR020472 -
Gma08g00250 720 PRINTS G protein beta WD-40 repeat signature 428 442 IPR020472 -
Gma08g00250 720 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 264 297 - -
Gma08g00250 720 MobiDBLite consensus disorder prediction 1 37 - -
Gma08g00250 720 ProSiteProfiles Trp-Asp (WD) repeats profile. 264 305 IPR001680 GO:0005515
Gma08g00250 720 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 368 400 - -
Gma08g00250 720 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 408 442 - -
Gma08g00250 720 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 2 719 - -
Gma08g00250 720 ProSiteProfiles Trp-Asp (WD) repeats profile. 368 408 IPR001680 GO:0005515
Gma08g00250 720 PANTHER WD REPEAT DOMAIN 44 2 719 IPR040324 -
Gma08g00250 720 SMART WD40_4 672 712 IPR001680 GO:0005515
Gma08g00250 720 SMART WD40_4 361 399 IPR001680 GO:0005515
Gma08g00250 720 SMART WD40_4 443 482 IPR001680 GO:0005515
Gma08g00250 720 SMART WD40_4 402 441 IPR001680 GO:0005515
Gma08g00250 720 SMART WD40_4 534 574 IPR001680 GO:0005515
Gma08g00250 720 SMART WD40_4 489 533 IPR001680 GO:0005515
Gma08g00250 720 SMART WD40_4 257 296 IPR001680 GO:0005515
Gma08g00250 720 Pfam WD domain, G-beta repeat 404 440 IPR001680 GO:0005515
Gma08g00250 720 Pfam WD domain, G-beta repeat 363 398 IPR001680 GO:0005515
Gma08g00250 720 Pfam WD domain, G-beta repeat 262 296 IPR001680 GO:0005515
Gma08g00250 720 MobiDBLite consensus disorder prediction 21 37 - -
Gma08g00250 720 Gene3D - 498 714 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00250 Gma-Chr8 2124112 2128580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00250 370 562 Miscellaneous Gene Families AT5G08390 26.633 2.04e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00250 - - gmx:100788374 1430.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00250 08 2124112 2128580 Gma08g00250 08 2124112 2128580 ECH
Gma05g02143 05 42577809 42581457 Gma08g00250 08 2124112 2128580 GST