Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00219 ATGACTCTAAACCTCTGCACTCCATGCTTCTCTCGCATGCTTCACCACCCTTTTTCTTCTTCTTCTTCTCTCCCCAACACTCACACTCCTTTGCCTTCTCTATTATTTTTCTCCCCTTCCTCACTCCCCAACCCTAACCAATCCACCTTCATAAGCACCAAAGCTTCCGTGAGCGAGAGCCACAATGAAACCTCCGACGACACCGCTGCCAACTTATTTGACCAACAACTCATCCTCCGACTCGCCGCAACCGCCAAAGACGCCGACGAGGCCTTACTAATGATCGCCGACAACTCCTCCCGAAACGACGGCGTCGTTTCCACCTCCGATTGCTGTTCCATTATCTCCGCAGCACTTAACCGCAACAATCCCCAACTCGCTCTCTCCATTTTCTACGCCATGCGCGCCACTTTTCATCAAGTTGGCGAGAGTGGTCCTTTGGCTGAGAGATGGAAGTGGTCGAGGCCAAATGCAAATGTTTATACATTGTTGATTCAAGGTTTAGCGGCGGTGTTAAGGGTTTCTGACGCTCTCAGGGTTATTAGATATATTTGTGAAATCGGCGTTTCTCCTGGTGAGGAGGTTCCGTTTGGGAAGATAGTCAAATGCCCTAGCTGTCGGATAGCTGTTGGTGTTGCACAACCACAACAAGGTATTCAGATAGTGTCTTGTGCAAAGTGTCGCTACCAATACGAACTTGTTTCAGGAGACATAGTCAGTATTGAATCAGAAGAAATCAGCATGGACATTACCGCATGGGAAAGGGGGTTAAGATACGTGAAACTGATGAAGCAAAGCATTCCTGCTGCTGTTCACTCTATTGTGGTGCAGACCCCTTCTGGTCTGGCTCGCACTCATAGATTTGCAACTGAAACAGTTGATCTGCCAGCTCAAGAAGGTGAAAGGGTAACTGTTGCTGTGGCAGCTCCATCTAATGTGTATCGAAAGGTGGGCCCCTTTAAATTCAGTCCAAGAGCCCCTGATTTCTATCCTGGTGAGGCTATGTGCATAACAAACCACAAGGATGGGCGGGAGTCACTACTGTTAAGAGCCCCAAGAAAAGAAGTAAATTCGTCATTACTCAAACCCTCCCTCATCTTTCCACTTCTTGCTTTGTTGGCCACCGGTGATGTTGCCTCTGGAATTATTGACCCCGGCCTTCCCCAATTGCTGTCAGTTGTTGCAGTTTCAACTCTTGTTGTTGGATCTACAGTGAATACTGTTGTTCTTCCTCAGTTTAATCAGCTTCCACAGAAATCAGTAGAAGTAACTGCGATCAAACAACAGCTTTTATCTCAATATGATGTTCTTCTGTCTCGCATCAATGACCTAAAAGAAGCTGCTGAAAAAGAGATTTGGATGTTAGCTCGAATGTGCCAACTTGAGAACAAAATTTCAGCTGTTGGAGAACCTGCTTATCGGACTCGGATAAGTAAAGTCAAAAGGGTTCGCGAGAGCCTGCAAAACTCCCTCAGGGGACGGATTGAATTGATTGAAAGCTATGCTAGGATTTCCTCAATGATTGAAATCGAAGTGGAGATGGAGACTGATGTTCTTGCTGCTGAAACTGCTAGTAATATGGATAGTATCAAAGAACAGATAGAGCAAATCATGGAGCTTGAAAATTTGGAGGAGAGATGGAAAATACAAGCAGAAGCAAATGATGAGGCTGAAAGACTTCTTAGTTCCCAGCCCATGCCTTTGGACGAAGTTTAA 1716 0.4598 MTLNLCTPCFSRMLHHPFSSSSSLPNTHTPLPSLLFFSPSSLPNPNQSTFISTKASVSESHNETSDDTAANLFDQQLILRLAATAKDADEALLMIADNSSRNDGVVSTSDCCSIISAALNRNNPQLALSIFYAMRATFHQVGESGPLAERWKWSRPNANVYTLLIQGLAAVLRVSDALRVIRYICEIGVSPGEEVPFGKIVKCPSCRIAVGVAQPQQGIQIVSCAKCRYQYELVSGDIVSIESEEISMDITAWERGLRYVKLMKQSIPAAVHSIVVQTPSGLARTHRFATETVDLPAQEGERVTVAVAAPSNVYRKVGPFKFSPRAPDFYPGEAMCITNHKDGRESLLLRAPRKEVNSSLLKPSLIFPLLALLATGDVASGIIDPGLPQLLSVVAVSTLVVGSTVNTVVLPQFNQLPQKSVEVTAIKQQLLSQYDVLLSRINDLKEAAEKEIWMLARMCQLENKISAVGEPAYRTRISKVKRVRESLQNSLRGRIELIESYARISSMIEIEVEMETDVLAAETASNMDSIKEQIEQIMELENLEERWKIQAEANDEAERLLSSQPMPLDEV 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00219 571 Coils Coil 427 447 - -
Gma08g00219 571 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 570 - -
Gma08g00219 571 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 157 191 IPR002885 -
Gma08g00219 571 Gene3D Tetratricopeptide repeat domain 75 201 IPR011990 GO:0005515
Gma08g00219 571 Coils Coil 530 560 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00219 - - gmx:100781803 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00219 08 1878374 1882916 Gma08g00219 08 1878374 1882916 ECH