Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00194 ATGGAATCCGCAGCTCTGTCGCGCATAGGCCTGGCGGGCCTGGCCGTGATGGGCCAAAACCTAGCCCTGAACATCGCGGAAAAGGGGTTTCCTATCTCCGTCTACAACCGCACAGCCTCGAAAGTGGACGAGACCGTAGATCGGGCCCGCAACGAGGGCTCCCTCCCTCTCACGGGCCAATACACCCCTCGCGACTTCGTTCTCTCCCTCCAGCGCCCTAGATCCGTCATCATCCTCGTCAAGGCCGGCGCCCCCGTCGACCAAACCATCGCCGCCCTCTCCGACCACCTCGACCCCGGCGACTGCATCATCGACGGCGGCAACGAGTGGTACGAGAACACCGAGCGCCGCATGAGCCTCGTCGCCGACAAAGGCCTCCTCTACCTCGGCATGGGCGTCTCCGGCGGCGAAGACGGCGCACGCCACGGCCCCTCCCTCATGCCCGGTGGGTCCCACCAGGCCTACTCCAACGTCCAGGACATCCTCCACAAAATCGCCGCCCAGGTCGAGGACGGCCCCTGCGTCACTTACATCGGCGAGGGAGGCTCCGGAAACTTCGTCAAAATGGTCCACAACGGAATCGAATACGGCGACATGCAACTCATCTCTGAAGCCTACGATGTTTTGAAGCACGTCGGTGGCTTGTCGAATTCCGAGCTTGCAGATATTTTCGCCGAGTGGAACCGAGGGGAACTTGAGAGTTTCTTAATTGAAATTACCGCAGATATTTTTAAAGTGAAGGATGAAGATGGTGAAGGGTTTTTGGTGGATAAGATTTTGGATAAGACCGGGATGaaggggaccgggaaatggacggtgcagcaggcggcggagctttcgatagcggcgcccacgattgcggcttcgttggattgccgtcttgcttactttgataccTATCGGAGGGCAAGGCTGCCGGCAAACCTTGTTCAGGCTCAGAGGGACTTGTTTGGGGCGCATACTTATGAGAGGGTTGATCGCCCCGGGGCTTTTCATACCGAGTGGACGAAGCTCGCCCGCAAGAGTGGGACTGGAGTTGGTGCACTCAATTGA 1053 0.5309 MESAALSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVDETVDRARNEGSLPLTGQYTPRDFVLSLQRPRSVIILVKAGAPVDQTIAALSDHLDPGDCIIDGGNEWYENTERRMSLVADKGLLYLGMGVSGGEDGARHGPSLMPGGSHQAYSNVQDILHKIAAQVEDGPCVTYIGEGGSGNFVKMVHNGIEYGDMQLISEAYDVLKHVGGLSNSELADIFAEWNRGELESFLIEITADIFKVKDEDGEGFLVDKILDKTGMKGTGKWTVQQAAELSIAAPTIAASLDCRLAYFDTYRRARLPANLVQAQRDLFGAHTYERVDRPGAFHTEWTKLARKSGTGVGALN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00194 350 PRINTS 6-phosphogluconate dehydrogenase signature 173 201 IPR006183 GO:0004616
Gma08g00194 350 PRINTS 6-phosphogluconate dehydrogenase signature 255 282 IPR006183 GO:0004616
Gma08g00194 350 PRINTS 6-phosphogluconate dehydrogenase signature 125 150 IPR006183 GO:0004616
Gma08g00194 350 PRINTS 6-phosphogluconate dehydrogenase signature 7 30 IPR006183 GO:0004616
Gma08g00194 350 PRINTS 6-phosphogluconate dehydrogenase signature 72 101 IPR006183 GO:0004616
Gma08g00194 350 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 8 179 IPR006115 GO:0050661
Gma08g00194 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 181 IPR036291 -
Gma08g00194 350 SMART 6PGD_2 184 336 IPR006114 GO:0004616|GO:0006098
Gma08g00194 350 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 1 293 - -
Gma08g00194 350 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 182 337 IPR008927 -
Gma08g00194 350 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 294 345 - -
Gma08g00194 350 Gene3D - 2 185 - -
Gma08g00194 350 Gene3D - 186 326 IPR013328 GO:0016491
Gma08g00194 350 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 294 345 IPR006183 GO:0004616
Gma08g00194 350 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 1 293 IPR006183 GO:0004616
Gma08g00194 350 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 184 294 IPR006114 GO:0004616|GO:0006098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00194 Gma-Chr8 1703406 1704893 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00194 K00033 - gmx:100803740 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00194 08 1703406 1704893 Gma08g00194 08 1703406 1704893 ECH