Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00178 ATGAGGGTGTTTTCTAGGTTCAAATTTCTGTCAAGAGCAGTGCACGAGGAACAAGAGGGTGAGCATGATGGGGGGGAGAAAATCAAGTACCCTTTAACGGAGGGAAATTTGTGTACGTCCTTAACATTAACGGTTTGGAGAAAATCCCTTGTGATTAGTTGTAAAGGATTCACGGTGATAGATCCATATGGAAACCTTGTGTATCGGGTGGACAATTACATCGTGCACCCCAACGAAGTCATTCTTATGGACGCTTCAGGAAACTCTGTTCTCACCTTGCGCCGCTCCAGGAAGCTAGGATTAGTAGATAGCTGGTTTGTGTATGAAGGGGAAATGGGGAAGCAGAAGGTTAAATCAAGAGATAGTCCAGTTTGTTGTGTACGGAAGCGTGTGAATATTTTAGACGGCAAACCCAAGGTTCAGGCCTACGTGTACCGCGTGACCTCGGATTCAGATAAAAGACATGCGGCGTTTACAATAGAAGGTTCCTATGCACATAGGACATGTAAAGTGTTGGATGAGTACAAGAAAGCCGTAGCTGAAATCAAGAGAAAGGAGGCCAATACCAAAGACGTCTCTTTCGGGATAGAGATTTTTCAGTTAGTTGTTCACCCTGGGTTTGATACTAGCTTTGCTATGGCACTAGTTTTACTACTGGATCAAATGTTTTCATAA 675 0.437 MRVFSRFKFLSRAVHEEQEGEHDGGEKIKYPLTEGNLCTSLTLTVWRKSLVISCKGFTVIDPYGNLVYRVDNYIVHPNEVILMDASGNSVLTLRRSRKLGLVDSWFVYEGEMGKQKVKSRDSPVCCVRKRVNILDGKPKVQAYVYRVTSDSDKRHAAFTIEGSYAHRTCKVLDEYKKAVAEIKRKEANTKDVSFGIEIFQLVVHPGFDTSFAMALVLLLDQMFS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00178 224 PANTHER PROTEIN LURP-ONE-RELATED 17 10 223 - -
Gma08g00178 224 Gene3D - 38 224 IPR038595 -
Gma08g00178 224 Coils Coil 172 192 - -
Gma08g00178 224 Pfam LURP-one-related 41 217 IPR007612 -
Gma08g00178 224 SUPERFAMILY Tubby C-terminal domain-like 41 223 IPR025659 -
Gma08g00178 224 PANTHER - 10 223 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00178 Gma-Chr8 1547704 1549033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00178 - - gmx:100796827 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00178 08 1547704 1549033 Gma08g00178 08 1547704 1549033 ECH
Gma05g02075 05 42004369 42005962 Gma08g00178 08 1547704 1549033 GST
Gma01g02226 01 57464923 57466067 Gma08g00178 08 1547704 1549033 PCT
Gma11g00189 11 1488979 1490094 Gma08g00178 08 1547704 1549033 PCT