Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00171 ATGAAGAAAGTGGTGGTGAAGTTGGATTTGCACGATGACAAAGCAAAGCAGAAGGCGATGAAGTCGGTTTCTAGCATATCAGGCATCTATTCCATCTCCATGGACATGAAGGAGAAGAAACTGACTGTAGAGGGTGACATAAACCCTGTCAATGTGGTGAGCAAATTGAGAAAAACCTGGCACCCAGAAATTGTAACTGTTGGGCCAGCAAAAGAGCCAGAGAATAAGAAAGATCCAAATCAACAAATTGAGGAGCTTGTCAAGCTCTACAAAGCATATAATCCCCACATGACCACACACTATTATGTTCAAAGTGCTGAAGAGAACCCAAATGCTTGTGCTATTTGTTGA 351 0.4217 MKKVVVKLDLHDDKAKQKAMKSVSSISGIYSISMDMKEKKLTVEGDINPVNVVSKLRKTWHPEIVTVGPAKEPENKKDPNQQIEELVKLYKAYNPHMTTHYYVQSAEENPNACAIC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00171 116 Pfam Heavy-metal-associated domain 6 60 IPR006121 GO:0046872
Gma08g00171 116 SUPERFAMILY HMA, heavy metal-associated domain 1 60 IPR036163 GO:0046872
Gma08g00171 116 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 82 - -
Gma08g00171 116 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 82 116 - -
Gma08g00171 116 Gene3D - 1 72 - -
Gma08g00171 116 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 82 116 - -
Gma08g00171 116 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00171 Gma-Chr8 1475887 1477660 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00171 - - gmx:100818139 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00171 08 1475887 1477660 Gma08g00171 08 1475887 1477660 ECH
Gma05g02068 05 41933292 41935978 Gma08g00171 08 1475887 1477660 GST