Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00161 ATGGCAACGACAACTAGAACAACTTTCCTCAAACGACGCAGCATCTCCGCTTCCGCCGAATCTCCCTCCAGCTACAGGATCCGCTTCTCTCCGATAATGGACTCCAACGAGTCCTTCCCTTCCAGCTTCTCCAAGTTTAACTCCGCCCTCACCGCGGGCCTCTTAAACCCAATGTCCCCCCCTCCCGACAAGACCCGATCCAGCCCAACCCTCTTCGAAATGATGGCTAGCGAGCCCGACGTCCACCACCGCCCCACCACCCACATCCCAAACCCCACCACTACCAACGCTAACCACAAGCCCCAGATTCTTGATCGCCAGGCCCTCATGATGCAGCGTATTTCCGAGCTCCTTGGTTCTCGCAGCCCCGGGAACCAGTTCAACGACCCCCTTTCCAGCGACATCAAGCTCACTCTCAGCTCCAAAGACGGTATCAGTGTTTCCATGAACGTTCATCGCCAAATCCTCGTTGCTCACAGTAGGTTCTTCTCTGTCAAGCTCTCCGATCGCTGGACCAACCTGCAGCAGCAGCGCTCCCCGGTTCCCTACGAAGTTGAAATCGCCGATTGCGACGATGTTGAGGTTTACATTGAGACTTTGAGGTTGATGTATTGTAAGGATCTTAGGAAGAAGCTCATGAGGGAGGATGTCTCCAGAGTTCTCGGTATCTTAAAGGTTTCAGCTGCGATTGGGTTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCCGCCCCGTGGGCGGAGGATGAGGAGGAGAAGGTGGCGTCACTGCTGTCTGAGCTTCGTCTTGAAGCAGTTGGAGCTGGGGAGGTTTTGAAGAGGGTTTCCACTGATGTTGTCAGTGGAAATGAAGAGGGGAGTGATAACGAGGAGGTTCTTCTTAAGCTTATTCGTGTGGTTCTTGAAGGGAAGGATGAGAAAGCCAGGCGCGAGATGAAAGGGTTAGTGTCGAAGATGCTGCGTGAGAATGCTTCGCAGAATGATCTTCGGAAGGAGTCGTTGTACTTGGCGTGTGACGATTGTCTGCAGTTACTTCGTCACCATTTTTTGCAGGCTGCGGCTTTGGACATGCAGGATGTGAGTCAAATTGCAAGACAAGCAGATAATTTGCATTGGATTTTGGATATTTTAGTTGACAGACAGATTGCCGAGGATTTCCTCAAGACATGGGCATCTCAGTCAGATTTAGCTGAAGTTCATTCTAAAGTGCCGGCAGTTCACAGGTTTGAGGTTAGCAGAGTTACGGCAAGGTTGTTTGTTGGGATTGGGAAAGGACAATTGTTGGCTTCTAAAGATGTCAGGTGTTTGCTTCTAAAAACTTGGCTGGTGCCCTTTTATGATGACTTTGGTTGGATGAGGAGGGCATCCAAGGGGCTTGATAGGCACCTAATTGAGGATGGTCTTAGTAACACGATTCTAACTCTTCCACTCTCCTGGCAACAGGATATTTTGCTTGCTTGGTTTAATCGTTTCTTGAATTCTGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAATGGAGAGCAAGAACGGACAAGACAGTTACGAATTACAACTACATCAGTCGAGAACCCTTGA 1617 0.4972 MATTTRTTFLKRRSISASAESPSSYRIRFSPIMDSNESFPSSFSKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMASEPDVHHRPTTHIPNPTTTNANHKPQILDRQALMMQRISELLGSRSPGNQFNDPLSSDIKLTLSSKDGISVSMNVHRQILVAHSRFFSVKLSDRWTNLQQQRSPVPYEVEIADCDDVEVYIETLRLMYCKDLRKKLMREDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAVGAGEVLKRVSTDVVSGNEEGSDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENASQNDLRKESLYLACDDCLQLLRHHFLQAAALDMQDVSQIARQADNLHWILDILVDRQIAEDFLKTWASQSDLAEVHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQDILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQERTRQLRITTTSVENP 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00161 538 ProSiteProfiles BTB domain profile. 133 212 IPR000210 GO:0005515
Gma08g00161 538 PANTHER OSJNBA0011J08.25 PROTEIN 39 536 - -
Gma08g00161 538 Gene3D Potassium Channel Kv1.1; Chain A 110 246 IPR011333 -
Gma08g00161 538 MobiDBLite consensus disorder prediction 1 23 - -
Gma08g00161 538 SUPERFAMILY POZ domain 123 243 IPR011333 -
Gma08g00161 538 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 39 536 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00161 Gma-Chr8 1380769 1384201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00161 - - gmx:100817611 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00161 08 1380769 1384201 Gma08g00161 08 1380769 1384201 ECH
Gma05g02058 05 41828704 41832238 Gma08g00161 08 1380769 1384201 GST
Gma08g00161 08 1380769 1384201 Gma04g02056 04 51024931 51027236 PCT
Gma08g00161 08 1380769 1384201 Gma06g01361 06 12812659 12815465 PCT