Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00101 ATGCCTACTCGAAAAGAGAGCACTGCACATTTTCAAAAAACTCCCCTTGTCGTGCAAAAAATGCCGCCTATACGCATACGCCGTCTCAGGCTCGACTCCGATTCCGACGGAGAAGAACAAGACCCACTCCAACCCCAATCCGAGCCACAAACCCATTTTCCGGTTGAAATCTCCGACGACGAGGACTTCCTCGACGTCCTCGACAGCCTCCCTCCGCCCTCTCCCGCCTGTCCTGTCACCGACTTCCTCCGCCGCCTTGGACTGTCACCCAAGAGTGACTGGCTCACTTCCTGCCTCCGCGAATTCCAGTCCTCCGTTCCGGCCTTTGAACACCTCGACGTCGCCGCAAAAGCCAAACGCTGTTTCGAGCAGTTTCTCTACGCCGACATGAATTTCTGCGGAAGTGGCATACTCCCTCCCAACGTAGACGCCATGCACCTTAACGTTCTCCCCGGTCCCTATGTATTGCAGGTTGATGAAATAATTAATATGACTTGTCCTCTACGAGGCAGATATGAAAAGGCAAATCCTGGAATTAAAAGATGTTTGAAGTTATCAATGACTGATGGCATTCAAAGAGTATTTGGAATGGAGTATAGGCCCATCGAAGCTCTTGAAGTTTGTGCCTCTTCTGGTTTAAAGGTTACTATCTCTAATGTACATGTGCGTCGTGGACTTCTTATGCTGGTACCTGAAACCATTGAAATATTGGGGGGATTGGTTGAGGAGCTGGATGCTGCCCGAAATCGCCTGGTTGGAGAATTAAAGAAGCCACCTAGACCTAGGGGGAGAAGAAACGGAGTGTTTATTCCTTTAGCGACTAGAGCAACTCTTGCTGCGTGGCCTCCAGGTGGAGTTGATGATCTTGCACGCAGTGGCTCCACGCTGCACAGTACTGATCCTGTACAGGAAAACAATCAAGGTTCTGGCCCGAGCATGTCTGGCACTGGTAACAGTAATTCAATACCCCACATGGCGTCAAATGCTGATGCTATGAACATGGATATGTCTAGAGATACCAATTCTGTTTCCCGTGGTAGCTCTATGGCTAACCAGCTCTCTTCTGTCATGTCAAAGGCTGAGGAGATGCACATAGATGCTTCTAATGTCACCagggaatattctgttgaccatcagtcttctaatatggtttcaaatgtttcagcagcatataatgatactgttcatataacaagagaaagttctgtggctactgagtgccctcccgttgttgaaagtgttgagacatacagggatagaactccagtagccacagatagttctcatccacgaagaacctcttccactgttagggaatattctgttgacaatcggttttctaacatggtttcaaatgtttcagtggtgcataatgacactgttcatataacaagggaaagttctgcaactactgagtgccctcctgttgttgaaaatgttgagacatacagagatagaactccagcagccactgatagttctcatccacgaagagcctcttcctctgttTTAAACACCAGCGATGTCGAGATGGGTGATGCCAGTGACCATCCACTCATACTGTCTGGAGACCAAGAGGTCCCGTTCACATACATGGCTAGTTTGTCAGCCAAGTGGGCTAAAATGAAAGAGGAAGCTCCTGCAATTCGGGGTAAAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTCCGGTACAAGAAGAGGACATCATATGAGCTTCAGGCATATGTAGACGATGGTAGCCTTATTTCTGAAATCCTCATTGATCATGATGTTGTACAGAAAGGAATTGGTTTTTCTCCTGAGGAGGTAACTGCGGCCATTTCTTCTCCTGACACGAAAACTGTCCAACAAATGAGGGATACAATGCATAAATTTCAAGCATTTTTAGCAAACTTTGAGGGAATAATTCTTGTGGAATTAAATAAAAAATCTTCCCTTCCACTTGCCCTAGAGATGAGTCAAGGCTGTCCTCAATCTGATGCACGGTTACTTCTGAGAAGGCTGAAGTCTCTTAACCCTCCACAAGTTCAAAAACCTACGGATCCAATTGAATTATCCCCGTAA 2067 0.3822 MPTRKESTAHFQKTPLVVQKMPPIRIRRLRLDSDSDGEEQDPLQPQSEPQTHFPVEISDDEDFLDVLDSLPPPSPACPVTDFLRRLGLSPKSDWLTSCLREFQSSVPAFEHLDVAAKAKRCFEQFLYADMNFCGSGILPPNVDAMHLNVLPGPYVLQVDEIINMTCPLRGRYEKANPGIKRCLKLSMTDGIQRVFGMEYRPIEALEVCASSGLKVTISNVHVRRGLLMLVPETIEILGGLVEELDAARNRLVGELKKPPRPRGRRNGVFIPLATRATLAAWPPGGVDDLARSGSTLHSTDPVQENNQGSGPSMSGTGNSNSIPHMASNADAMNMDMSRDTNSVSRGSSMANQLSSVMSKAEEMHIDASNVTREYSVDHQSSNMVSNVSAAYNDTVHITRESSVATECPPVVESVETYRDRTPVATDSSHPRRTSSTVREYSVDNRFSNMVSNVSVVHNDTVHITRESSATTECPPVVENVETYRDRTPAATDSSHPRRASSSVLNTSDVEMGDASDHPLILSGDQEVPFTYMASLSAKWAKMKEEAPAIRGKIKCFLTGVKGFRYKKRTSYELQAYVDDGSLISEILIDHDVVQKGIGFSPEEVTAAISSPDTKTVQQMRDTMHKFQAFLANFEGIILVELNKKSSLPLALEMSQGCPQSDARLLLRRLKSLNPPQVQKPTDPIELSP 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00101 688 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 75 675 - -
Gma08g00101 688 MobiDBLite consensus disorder prediction 29 53 - -
Gma08g00101 688 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 528 669 IPR032199 GO:0000166
Gma08g00101 688 Pfam RecQ mediated genome instability protein 85 249 IPR013894 -
Gma08g00101 688 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 75 675 - -
Gma08g00101 688 Gene3D - 129 255 IPR042470 -
Gma08g00101 688 MobiDBLite consensus disorder prediction 292 358 - -
Gma08g00101 688 MobiDBLite consensus disorder prediction 289 358 - -
Gma08g00101 688 SMART DUF1767_2 80 173 IPR033472 -
Gma08g00101 688 MobiDBLite consensus disorder prediction 486 509 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00101 K10990 - gmx:100803734 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00101 08 884643 887826 Gma08g00101 08 884643 887826 ECH