Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00097 ATGGATGTTTGCGTAAAAGAAGAAGTCTTGGAGACTCCGATTGTCACCGAGAGGAGGCCAAGAAACGCCGTCGTTTCGGCGCTCCCTCCGGGTTTGGTAATTGAACTCAGCGATTCCGATACGGACGAGGGCGATTTGGATAGTGTTGTCGCCAATGCAGTGAACGGTGCTACGGTGGAGAGTCCGTCCAAGAAGCGAAGGACGAGCGAGGCTGGAGGAGTGGTTTTGCCGGTTGGATTCCTCACCCCTCTCCCTCCGGCGCCGGTGCCGGTGCCTCCTCCCGCGGCGGTGCTCTCTTTGCCGGCGCCGGAATGGGCCTCTAATTCGGCATCGCGCGTCAACGCGAGTAAGAGTTTTAGTCTGAATAGCTCCAAGCAGTTCTGGAAGGCTGGGGATTACGATGGTGCTCCTCTCGGCGGCTCTGGATCTTCAACAGTTGGTATGGATCATGTCAGAGTTCACCCCAAGTTCTTACACTCTAATGCAACAAGTCATAAATGGGCTCTTGGAGCGTTTGCTGAGCTTTTGGACAATTCATTGGATGAGGTTTGCAATGGGGCCACATATGTTAATGTAGATATGCTTATAAATAAGAAAGATGGCACCAGGATGTTGCTGGTTGAAGATAATGGTGGTGGGATGGATCCTGAAAAAATGCGTCAGTGCATGTCGCTGGGGTATTCCATGAAAAGCAAAATGGCAAATACAATTGGTCAATATGGAAATGGTTTTAAGACAAGTACCATGAGGCTCGGGGCTGATGTAATTGTATTCTCCCGTTATCCTGGGAAAGATGGGAAAAGCTCTACACAGAGCATAGGGTTGCTGTCTTACACATTTTTGAGGAGTACTGGGAAGGAAGACATTGTAGTACCCATGCTGGACTATGAAAGAAGAGGACAGGAATGGAATAAGATAATACGAACTTCTCTGGATGATTGGAATAAAAATGTTGAAACAATAGTACAATGGTCACCATTTTCCAATGAGGCTGATCTACTTCTTCAGTTCAACTTGGTGAAAGATCATGGTACACGAGTAATTATATACAATCTTTGGGAAGATGACCAAGGTCAGCTGGAACTTGATTTCGATGAAGACCCACATGATATCCAAATAAGAGGCGTAAATCGAGATGAGAAAAACATACAGATGTCTAAAGAGTTTCCCAATTCTAGACATTTCTTGACCTATCGACATTCACTAAGGAGTTATACTTCTATTTTATATCTGAGACTTCCTTCTGGCTTCCGAATTATTCTTCGTGGGAAAGATATTTTGCATCACAACATAGTGAATGATATGATGATGTCTCAGGAGGTGACCTACAGGCCTCAAGCAGGAGTCGATGGACTTCTTCCAAAGGATTCAAATATGGTTGCTGTTGTTACTATTGGATTTGTCAAGGATGCAGTACACCATGTTGATGTTTCAGGTTTTAATGTTTATCATAAGAATCGACTCATTAAGCCATTCTGGAGGATCTGGAATCCAGCTGGAAGTGGAGGGCGTGGGGTCATAGGTGTGTTGGAAGCCAATTTTGTTGAACCTGCTCATGATAAGCAGGGCTTTGAGCGTACATTAGTTTTATCAAGACTGGAGTCTAAATTGATACAAATGCAGAAAAAATACTGGAGCACTAACTGCCATAAAATCGGTTATGCTTCCAATCGAAGTAAAATACAAATAAGAGATTATGCTGATAAAGAGGCATCTCCTGATTATTTTCCAGAATCATCACAATCAAAAAGGAAATATTCTACCATGGATGACAAGGCTACACCGTTGACATCCGACAAATTGCGTTCACACTCGGATCAGAAACGGATACAAAAACAAACAGATAAATATATTGCCTATAAAAATGGTCAATCTTCGGTCTCTCCTAGACGCAGAATGCAAAGTTTATCTGAACAATCATCATCTGATGACGAAGTCAGTGAAGTCTTGCCTAAGAAAAAAACTCAAAAGATATCTACTGCTGAAAAATCATTTGAAAAGGAGAATGGATGTTCTCAAGATACCACATCAAGGGGAAAATCCTCACAGTACACACGAGGATCCAAGCTAGAGCTGCAGGGAAAAAGTGTTAATGATGGTGAGCAACCACCATCTGACAACGATTTACTAACTCTCGAGCAATTGAAAAAAGAGAATCGTGAGTTGAAGGAGAGATTACAAAGGAAAGAGGAGGATATTTTAGGGCAAGTGTTGCAGGATCTGCAGCATGAGAAAGACAGGTGTAAATCTCTTGAAACTCAGCTCATTGATGCAGAAAAAAAGCTTGAAGAGTTGAACAATGAGCAGGAAACTCTCATTGATGTATTCGCTGAAGAGAGGGATAGACGTGATGCTGAAGAGAAAAAATTGAGAAATAAGCTCGAGGAGGCATCAAATACTATCCGAGAGCTGCTTGATAAGACACGCAAGCTTGAAAGGAAGTCTTCAAGCGGCAAACCAGATCGATGA 2469 0.4309 MDVCVKEEVLETPIVTERRPRNAVVSALPPGLVIELSDSDTDEGDLDSVVANAVNGATVESPSKKRRTSEAGGVVLPVGFLTPLPPAPVPVPPPAAVLSLPAPEWASNSASRVNASKSFSLNSSKQFWKAGDYDGAPLGGSGSSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVNVDMLINKKDGTRMLLVEDNGGGMDPEKMRQCMSLGYSMKSKMANTIGQYGNGFKTSTMRLGADVIVFSRYPGKDGKSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERRGQEWNKIIRTSLDDWNKNVETIVQWSPFSNEADLLLQFNLVKDHGTRVIIYNLWEDDQGQLELDFDEDPHDIQIRGVNRDEKNIQMSKEFPNSRHFLTYRHSLRSYTSILYLRLPSGFRIILRGKDILHHNIVNDMMMSQEVTYRPQAGVDGLLPKDSNMVAVVTIGFVKDAVHHVDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLESKLIQMQKKYWSTNCHKIGYASNRSKIQIRDYADKEASPDYFPESSQSKRKYSTMDDKATPLTSDKLRSHSDQKRIQKQTDKYIAYKNGQSSVSPRRRMQSLSEQSSSDDEVSEVLPKKKTQKISTAEKSFEKENGCSQDTTSRGKSSQYTRGSKLELQGKSVNDGEQPPSDNDLLTLEQLKKENRELKERLQRKEEDILGQVLQDLQHEKDRCKSLETQLIDAEKKLEELNNEQETLIDVFAEERDRRDAEEKKLRNKLEEASNTIRELLDKTRKLERKSSSGKPDR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00097 822 PANTHER PROTEIN MICRORCHIDIA 7 1 807 - -
Gma08g00097 822 MobiDBLite consensus disorder prediction 617 644 - -
Gma08g00097 822 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 170 272 - -
Gma08g00097 822 MobiDBLite consensus disorder prediction 670 692 - -
Gma08g00097 822 MobiDBLite consensus disorder prediction 584 615 - -
Gma08g00097 822 Gene3D - 155 360 IPR036890 -
Gma08g00097 822 MobiDBLite consensus disorder prediction 645 669 - -
Gma08g00097 822 MobiDBLite consensus disorder prediction 571 709 - -
Gma08g00097 822 Coils Coil 741 814 - -
Gma08g00097 822 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 170 368 IPR036890 -
Gma08g00097 822 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 1 807 IPR045261 GO:0016887
Gma08g00097 822 Pfam Morc6 ribosomal protein S5 domain 2-like 400 545 IPR041006 -
Gma08g00097 822 Coils Coil 705 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00097 Gma-Chr8 834358 852327 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00097 - - gmx:100816702 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00097 08 834358 852327 Gma08g00097 08 834358 852327 ECH