Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02305 ATGGAAAATACGAACGGGTTCGTGCACTTTGATGTGGTTTCAGATGATGCAGATCACCACTTTCTGGGTTCAAATAAAGGAAAATGCTTCACAGATTTAAAGAGTGAAGTGTACCGCACCATCATGAAAGAGTGGAAAATCCTGGAGCAGAATTTACCGGAATCCATATACGTGCGGGTCTACGAACGACGCATTGATCTAATGAGAGCCGTGATCGTAGGTGCCGCCGGCACACCGTACCACGATGGTCTGTTCTTCTTCGACATAGGGTTCCCCTCCGATTACCCGAAAAATCCCCCAAAGCTGCATTACCACTCGTTCGGCTACAGACACAACCCAAATCTCTACTCCAGCGGAAGAGTGTGCTTGAGCCTTCTGAACACGTGGACAGGGAGAAAGAGTGAGAAGTGGGACCCATCTGGGTCCACGATGCTCCAAGTGTTGCTCTCTATCCAAGCACTGGTTCTCAACAAGAAGCCATATTATAACGAGCCTGGACTGGCTAGTATTGCGTCCTCCGAGTGGAGGTCACGTGCCTACAACGAGAACGTCTTTCTTATTACTTGCAGCACCTCCCTTCATCTGCTTCGGAGGCCTCCCTTCAACTTTGAAGCATTTGTCAGTGCCCATTTTCGCCAGCGCGCGTTTCGGATTCTCTCGGCATGCAGCGACTACACGAATGGGCGCGCGAGGGTTGGCCATTACTCTTTTGACTTGCGTCTGTCTTCTTCTTCGTCAAAGCTACATGTTTCACGGAGTTTTAAAAAGCAGATGATAGCGTTTTACCCTCGGCTTCTTCAAGCATTTCGACAGAATGGAGCTTCTTTGGAGGGTTTCGCCGAACATTTGGAGCTCGAGAGTAAGCATTCCGAAAACAAAAGCGGTGGAATCTTCAAGAAGGTCATGGAAAAGATCAAAAAGGCTTTCGGATTGAAGAAAAACAAAGGACAACAAAGTCGTCTTGAAAGTGCTTAA 975 0.48 MENTNGFVHFDVVSDDADHHFLGSNKGKCFTDLKSEVYRTIMKEWKILEQNLPESIYVRVYERRIDLMRAVIVGAAGTPYHDGLFFFDIGFPSDYPKNPPKLHYHSFGYRHNPNLYSSGRVCLSLLNTWTGRKSEKWDPSGSTMLQVLLSIQALVLNKKPYYNEPGLASIASSEWRSRAYNENVFLITCSTSLHLLRRPPFNFEAFVSAHFRQRAFRILSACSDYTNGRARVGHYSFDLRLSSSSSKLHVSRSFKKQMIAFYPRLLQAFRQNGASLEGFAEHLELESKHSENKSGGIFKKVMEKIKKAFGLKKNKGQQSRLESA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02305 324 Pfam Ubiquitin-conjugating enzyme 41 184 IPR000608 -
Gma07g02305 324 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 2 295 - -
Gma07g02305 324 SMART ubc_7 39 193 - -
Gma07g02305 324 CDD UBCc 38 188 IPR000608 -
Gma07g02305 324 Gene3D Ubiquitin Conjugating Enzyme 1 277 IPR016135 -
Gma07g02305 324 SUPERFAMILY UBC-like 33 200 IPR016135 -
Gma07g02305 324 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 36 193 IPR000608 -
Gma07g02305 324 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02305 Gma-Chr7 45901794 45902768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02305 7 274 Miscellaneous Gene Families AT2G33770 51.292 9.90e-82 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02305 K10581 - gmx:100791343 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02305 07 45901794 45902768 Gma07g02305 07 45901794 45902768 ECH