Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02277 ATGTTCTTCAGCGGCGATCCTTCGACGCGGAAGCGTGTCGATTTGGGAGGTCGCAGTTCAAAGGAAAGGGACCGGAAGAACCTTCTAGAACAGACGCGAGTTGAACGCAACCGGCGCTTATGGTTGCGCCAGCAGAACTCTGCTGTACTCAAAATTCAGAAATGCTTCAGAGGGAGAAAAGCTGTCAGAACTGAACAATCTAAGGTGCGAGAGCAGTTCTATAAAATCTATGGGAAGCATTGCCAGAACGTGGACAGGAATTCTTTTGGTCCAGATTCTAATTTCCTCTACCAGTTCCTCTATTTCTTTAAGGCAGAAAATATTGATGATTTCTTAGTTCTTGTGCAAATATGCCGGTTGCTTTGGTGGTCTGTTCAGGATAATGGGGATGTTGTGAAACTTTTTGCAGGGGTGGATTATTCATCCACACGTGCTTTGGTGAACTTTAGAGTGAAGCGATTTGTACAAGCTTGTGTTTGTGCTCTGCATCAGAATAGAAATCAGTTAAAGGATCAGCTTTTATTGACTCCTGAGGAATTGAATGTGTCAGCTATTCCTTTATTGGAGGTTTTAGTATTGTTAATTGATCCCAAATTGCCATGGAGCTGTAAGATAGTTGAATATCTCATTCAAAACAATGCAGTTGGCCTACTCAGAGAGATAATTCTTACAGGAAAGGATAATGCAGAAAATTATTTTTCCATTGGCAAGGGATCATCATTGGAGCGTGTGCTTATTGCTGTAATATGTCATGTTGGTCAGAAGCCATGTATCTGTTCACAAATTAATCCAAGATATAGCTTTGCATCACAGATCATTACTATTCCTTTCTTGTGGCATCTTTTCCCAAATTTACAACAGATTTTTGCCGCAGACGACCTGAACCAATGCTACATTCATCAAATGGCAATGTTTGGGCAAAATCTGATCAATTTGCTACCTAAGGATATATCAACTGAATTTCCGAGCCATGCGTGTATGCTTGGAAATGTATTAGAAACTGCTGGAATTGCTTTGTCCCATCCTAACTGTTCATTTGACATGGCCATAGACCTTGCAGCTGTCACTACATTTTTGCTGGAGGCACTCCCATCTGTGAAAACTTCCAATAGTAGAGAAAGTCCTATGATTGCTGAGGATGATATGACTGGAGACAATGAAGTCATGGAAATAGCTTTAGATAGGAAATTGGAGCAGCAAATTTATAATGCCATAAATCCTCGCTTCCTTCTGCAACTGACAAATATACTATTTAAAGAGATTTCATCTGTCAATGGTTCAGATTATGGACCCAACGATAGAGATGTTACAGCTGTTGATGGGGTTTGTGGGTTTTTGAATGTTACCTTCAACAAACTGCCACTTGAACGGATTATGACAGTGCTAGCTTACAGAACTGAACTTGTTCCAACACTTTGGAATTTTATGAAGCGGTGTCATGAGAACCAAAAATGGTCATCACACTTCTCAAATGATGCACCTGGTTGGCTGTTACCTCTGGCTGTATTCTGTCCTGTCTACAAGCACATGCTTATGATTGTCGATAATGAAGAATTTTATGAGCAGGAGAAACCGCTATCACTGAAGGACATTAGAAGCCTCATCATTATATTGAGACAGGTTCTGTGGCAGCTACTGTGGGGGAATCATATCACATCTGCTAATTCGGTAAAATCTGTTCCAGTTAGTTCAGCTAGTAAGGGGCAGTCTGTTCAGACCATTCAACAGAGGGTTAGCATTGTAGTGTCTGAGCTTCTCTCCCAGCTGCAAGATTGGAACAATAGGCAGCAGTTTACATCCCCCAGTAACTTCCAGGCTGATGGGGTGAATGACTTATTTAGCTCTCAGGCTGTAATAGAAAATACACGAGCAAATGAAATTTTGAAACAGGCCCCTTTCTTGATACCATTTACGAGCAGGGTTAAAATATTCTCTTCTCAACTAGCTGCTGTTAGGCAAAGGCATGGACCTCAAGCTGTATTTTCTAGAAATCGGTTCAGAATAAAACGAGATCGTATTTTGGAAGATGCTTATAATCAAATGAGCCAGTTGACAGAAGATAGTCTTCGAGGATCGATTCGTGTGACTTTTGTCAATGAATTTGGAGTTGAAGAGGCTGGAATTGATGGTGGTGGAATATTCAAAGATTTCATGGAGAACATCACACGTGCTGCCTTTGATGTTCAATATGGATTATTTAAGGAAACAGCGGATCACCTGCTTTATGCTAATCCTGGATCTGGAATGATACATGAACAACATTTCCAATTTTTCCACTTCCTTGGTACTCTTCTTGCAAAGGCTATGTTTGAAGGGATTCTGGTTGATATACCATTTGCTACATTCTTCTTGAGCAAATTGAAACAAAAGCACAACTATTTGAATGACTTGCCTTCCTTAGACCCAGAATTATATCGTCATCTCATTTTTCTTAAGCATTATAAGGGTGACATTTCGGAGTTGGAACTATACTTTGTTATAGTAAATAATGAATATGGAGAACAAACAGAGGAGGAACTGCTTCCTGGAGGAAGGAACCTGCGTGTCACCAATGAAAATGTCATTACTTTTATTCATCTTGTAGCCAATCACCGCTTGAATTTTCAGATACGCCAACAAAGTTCACATTTCTTGAGGGGATTTCAGCAACTTATTCAGAAGGATTGGATTGACATGTTTAATGAACATGAACTTCAGCTTCTGATATCAGGTTCACTTGACAGCTTGGATATTGATGATCTGCGGCTGCATACCAACTATGCAGGAGGCTATCATGGTGAGCATTATGTTATGGAGATGTTTTGGGAAGTTCTCAAAGGCTTTTCACTGGAAAACAGGAAGAAATTTCTGAAGTTTGTGACAGGTTGCTCTCGTGGGCCATTGCTTGGTTTCCGATATCTTGAACCTATGTTTTGCATACAAAGGGCTTCCGGTAATGCCGCTGAGGAATCACTTGACCGATTACCAACATCGGCTACTTGTATGAATCTACTAAAGCTTCCGCCTTATACAAGCAAGGAGCAATTGGAAACCAAATTACTGTATGCCATAAATGCCGATGCTGGCTTTGATTTAAGTTAA 3081 0.4044 MFFSGDPSTRKRVDLGGRSSKERDRKNLLEQTRVERNRRLWLRQQNSAVLKIQKCFRGRKAVRTEQSKVREQFYKIYGKHCQNVDRNSFGPDSNFLYQFLYFFKAENIDDFLVLVQICRLLWWSVQDNGDVVKLFAGVDYSSTRALVNFRVKRFVQACVCALHQNRNQLKDQLLLTPEELNVSAIPLLEVLVLLIDPKLPWSCKIVEYLIQNNAVGLLREIILTGKDNAENYFSIGKGSSLERVLIAVICHVGQKPCICSQINPRYSFASQIITIPFLWHLFPNLQQIFAADDLNQCYIHQMAMFGQNLINLLPKDISTEFPSHACMLGNVLETAGIALSHPNCSFDMAIDLAAVTTFLLEALPSVKTSNSRESPMIAEDDMTGDNEVMEIALDRKLEQQIYNAINPRFLLQLTNILFKEISSVNGSDYGPNDRDVTAVDGVCGFLNVTFNKLPLERIMTVLAYRTELVPTLWNFMKRCHENQKWSSHFSNDAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLKDIRSLIIILRQVLWQLLWGNHITSANSVKSVPVSSASKGQSVQTIQQRVSIVVSELLSQLQDWNNRQQFTSPSNFQADGVNDLFSSQAVIENTRANEILKQAPFLIPFTSRVKIFSSQLAAVRQRHGPQAVFSRNRFRIKRDRILEDAYNQMSQLTEDSLRGSIRVTFVNEFGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETADHLLYANPGSGMIHEQHFQFFHFLGTLLAKAMFEGILVDIPFATFFLSKLKQKHNYLNDLPSLDPELYRHLIFLKHYKGDISELELYFVIVNNEYGEQTEEELLPGGRNLRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQLLISGSLDSLDIDDLRLHTNYAGGYHGEHYVMEMFWEVLKGFSLENRKKFLKFVTGCSRGPLLGFRYLEPMFCIQRASGNAAEESLDRLPTSATCMNLLKLPPYTSKEQLETKLLYAINADAGFDLS 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02277 1026 CDD HECTc 664 1024 IPR000569 GO:0004842
Gma07g02277 1026 Pfam HECT-domain (ubiquitin-transferase) 721 1026 IPR000569 GO:0004842
Gma07g02277 1026 SMART hect_3 683 1026 IPR000569 GO:0004842
Gma07g02277 1026 PANTHER BNAC01G43970D PROTEIN 1 1026 - -
Gma07g02277 1026 Gene3D Hect, E3 ligase catalytic domains 666 904 - -
Gma07g02277 1026 MobiDBLite consensus disorder prediction 1 28 - -
Gma07g02277 1026 ProSiteProfiles IQ motif profile. 45 72 IPR000048 GO:0005515
Gma07g02277 1026 Gene3D Hect, E3 ligase catalytic domain 908 1025 - -
Gma07g02277 1026 SUPERFAMILY Hect, E3 ligase catalytic domain 654 1018 IPR035983 GO:0004842
Gma07g02277 1026 Gene3D Hect, E3 ligase catalytic domain 790 869 - -
Gma07g02277 1026 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 1 1026 IPR044611 GO:0000209|GO:0061630
Gma07g02277 1026 ProSiteProfiles HECT domain profile. 685 1026 IPR000569 GO:0004842
Gma07g02277 1026 MobiDBLite consensus disorder prediction 11 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02277 Gma-Chr7 45614601 45630160 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02277 K10589 - gmx:100789933 2037.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02277 07 45614601 45630160 Gma07g02277 07 45614601 45630160 ECH