Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01055 ATGGCCGAGCAAACCTTCATCATGATCAAGCCAGATGGCGTTCAAAGAGGCCTTATTGGCGAGATTATTAGCAGATTTGAGAGGAAGGGTTTTTACTTGAAAGGGTTGAAACTCGTTACTGTGGACCGTCCTTTTGCTGAGAAGCACTATGCTGATTTGTCTGCAAAGCCTTTCTTTAGTGGTTTGGTGGATTACATTGTCTCTGGCCCTGTTGTTGCCATGATCTGGGAGGGTAAGAATGTTGTTACAACTGGCCGAAAGATTATCGGAGCCACAAACCCAGCTCAATCTGAGCCTGGAACTATTCGTGGTGACTTTGCTATTGACATTGGAAGGAATGTTATCCATGGAAGTGATTCAGTTGAGAGTGCTAACAAGGAAATTGCATTGTGGTTCCCTGAGGGCCCTGCTAACTGGCAAAGCTCCCAGCACTCTTGGATCTATGAGTAA 450 0.4556 MAEQTFIMIKPDGVQRGLIGEIISRFERKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIVSGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDSVESANKEIALWFPEGPANWQSSQHSWIYE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01055 149 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 3 149 - -
Gma07g01055 149 Pfam Nucleoside diphosphate kinase 3 134 IPR034907 -
Gma07g01055 149 PRINTS Nucleoside diphosphate kinase signature 5 27 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gma07g01055 149 PRINTS Nucleoside diphosphate kinase signature 49 68 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gma07g01055 149 PRINTS Nucleoside diphosphate kinase signature 69 86 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gma07g01055 149 PRINTS Nucleoside diphosphate kinase signature 90 106 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gma07g01055 149 PRINTS Nucleoside diphosphate kinase signature 113 132 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gma07g01055 149 SMART ndk_5 2 139 IPR034907 -
Gma07g01055 149 ProSitePatterns Nucleoside diphosphate kinases active site. 113 121 IPR023005 -
Gma07g01055 149 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 3 149 - -
Gma07g01055 149 SUPERFAMILY Nucleoside diphosphate kinase, NDK 2 148 IPR036850 -
Gma07g01055 149 Gene3D - 1 149 IPR036850 -
Gma07g01055 149 CDD NDPk_I 3 132 - -
Gma07g01055 149 Hamap Nucleoside diphosphate kinase [ndk]. 2 137 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01055 Gma-Chr7 12920293 12922470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01055 K00940 - gmx:547709 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01055 07 12920293 12922470 Gma07g01055 07 12920293 12922470 ECH