Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00845 ATGAGGTCTTCTTCTTCGGACAGGAACAGGATCAACATCGCTGCCAGTGCTCAGAAAGTCGATGTCGATAACCGAATCTCTCTCCGATTCTACTACCGCATCGCCGATAACATCCTCCGACAGGCCGATATCTTTCGTGCAGAGAAGAATATTATTGACCTATATGTCATGCTTTTAAGATTTTCTAGTTTGGTGTCGGAGACAATACCACGTCACCGAGACTATAGATCATCTCCACCAAGGCAGAAAGAATCATTGAAAAAGAAATTGTTAATTTCTTTGAATGAACTGGAGAACTTGAAACCAGTGGTCCAACAGAAGATCAATGAGCTTAACAGCAAACTTGCATACCAACAAAATGGACAGGGAAAATTTAGTTCAAATAATTCACTGGATTTTTCTCCCGTGAAAAAGCAAACTTCGGCTAGTTATGGCCTAATAAAGGCTGTCAGGCCTACTGCTGGGGAGTTTGTTTACCAAGGATCAAGGAGCCAACCTTTCTCTTATGTCAGGCCTGTGGAAGAGCATGCACGAAGACTATCTCTAACTCTTCCACCTCCAAAGGAAGAAACTCTCTCTAGACATTCTATCCTTGGTCCCAACGGGCTAAAAGGGCAGTGGAGACCACCTATCATTGATAAAGGGATCAAGTATCCAAGCAACATAGATCTGTCTCCTGTTGAATTACCAAGCCTACAACATTCCTTGGAAGATGAATCTCTGAAAAAGAAGGATAACAGCATTGCAGAACACCATAAATCAGAGTTAGATTCAATTCTAACCCAAAGTGAGGACTGCCAGCCCCATCCCCAACCTCAGCCTCAGCATGATCAGGAGCCTCCTTCTCTTATTTCTTTTGAGACAACTGAAACCTCTGCTCGAATAGAAGTTATCAGACAACCTTCTCCTCCACCCGTACTTGCTGAAGTACAAGATTTGGTCCCTGCAGTGTCACCTTGTGTTAATGAGGCAGGATGTAAGACAGAGATTCCATCATCAGATAGTTCTGTTCATGTCGAGGCTCCAATGCAATTGCACATTTCAACTGCTTTAATGGAGAGTTTTATGAAGCTTGCCAAGTCAAATACAAAAAAAAATTTAGAGACTTGTGGTGTCCTTGCTGGTTTGCTTAAAAACAGAAAATTTTATATTACTGCCCTTATAATCCCAAAGCAGGAGTCAACATCAGATTCTtgtcagactacaaatgaagaggaaatatttgaagtgcaagataaacggtctctttttccccttgggtggatccatACACATCCTACACAATCTTGTTTTATGTCATCAATTGATCTGCACACCCATTACTCCTATCAGATTATGCTGCCAGAATCTGTTGCAATAGTTATGGCGCCAAGAGATAGTTCGAGAAACCATGGCATTTTTCGGTTGACAGCCCCTGGTGGAATGTCTGTGATTAAACAATGTGATCAACGTGGCTTTCATCCACATAGTCAGCCTCCAGATGGTGGTCCGATTTACAAGACATGTACAGATGTATACATGAACCCAGATTTAAAATTTGAGGTAATTGATCTTCGATGA 1560 0.3987 MRSSSSDRNRINIAASAQKVDVDNRISLRFYYRIADNILRQADIFRAEKNIIDLYVMLLRFSSLVSETIPRHRDYRSSPPRQKESLKKKLLISLNELENLKPVVQQKINELNSKLAYQQNGQGKFSSNNSLDFSPVKKQTSASYGLIKAVRPTAGEFVYQGSRSQPFSYVRPVEEHARRLSLTLPPPKEETLSRHSILGPNGLKGQWRPPIIDKGIKYPSNIDLSPVELPSLQHSLEDESLKKKDNSIAEHHKSELDSILTQSEDCQPHPQPQPQHDQEPPSLISFETTETSARIEVIRQPSPPPVLAEVQDLVPAVSPCVNEAGCKTEIPSSDSSVHVEAPMQLHISTALMESFMKLAKSNTKKNLETCGVLAGLLKNRKFYITALIIPKQESTSDSCQTTNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPESVAIVMAPRDSSRNHGIFRLTAPGGMSVIKQCDQRGFHPHSQPPDGGPIYKTCTDVYMNPDLKFEVIDLR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00845 519 CDD MPN_AMSH_like 344 519 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Gma07g00845 519 PANTHER AMSH-LIKE PROTEASE 1 519 - -
Gma07g00845 519 SMART pad1_6 344 472 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma07g00845 519 MobiDBLite consensus disorder prediction 184 204 - -
Gma07g00845 519 Pfam USP8 dimerisation domain 13 107 IPR015063 -
Gma07g00845 519 MobiDBLite consensus disorder prediction 263 282 - -
Gma07g00845 519 Coils Coil 94 114 - -
Gma07g00845 519 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 344 448 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma07g00845 519 Gene3D - 3 130 - -
Gma07g00845 519 ProSiteProfiles MPN domain profile. 345 475 IPR037518 -
Gma07g00845 519 SUPERFAMILY JAB1/MPN domain 343 475 - -
Gma07g00845 519 Gene3D Cytidine Deaminase, domain 2 326 519 - -
Gma07g00845 519 PANTHER AMSH-LIKE UBIQUITIN THIOESTERASE 1 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00845 Gma-Chr7 8992139 8998943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00845 K11866 - gmx:100804754 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00845 07 8992139 8998943 Gma07g00845 07 8992139 8998943 ECH