Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00656 ATGCAAGCACAGTGTCCGTCACTCCCAGATTGCACTCTTCAAGTGCCCAGATTCTCAATCAGTGCCACTCCTCCAAATTTTGCATCTTTTCTGAGCCCCTCCAAGGTTGCAATCAAATTGAGTTGTGGGATTCACAAACCAATTTGTAGGAGTAGGTGTGATGGTTTAAGGGTGCAGTGTGCTGGTTCCAATGGAGAAAATGATGACGATGATGGGTTTTACATCAGAAGATGTGTTGAGCTTGCAAGAAAGGCTGTTGGGTTCACCAGCCCCAATCCATTGGTGGGCTGTGTTATTGTAAAGGATGGCAAAGTTGTTGGTCAAGGCTTCCACCCTAAAGCAGGCCAACCTCATGCCgagGTGTTTGCTCTGAGAGATGCTGGTGACTTGGCGCAAAGTGCGACGGCTTATGTCAGCTTGGAGCCTTGTAATCATTTTGGCAGGACTCCACCTTGCACTGAAGCTCTAATTAAAGCCAAAGTGAAAAAGGTTGTTGTTGGGATGGTGGATCCAAATCCCATAGTTGCCTTCAAAGGGGTGGAAAGATTGAGAGATGCTGGAATTGAAGTTGTTGTGGGTGTAGAGGAAGAGCTCTGCAAGAGCCTCAATGAGCCCTATATTCATCGCATGTTGACCGGAAAGCCTTTCCTTACTTTGCGATATTCTCTTTCTGTCAATGGAAACTTTATGGACTTACTTGGGGATGGAGTTACAGACTGTGGTGGATACTACTCAAGGTTATTACAAGAATATGATGCAGTGACAATAAAACAGTAA 777 0.4517 MQAQCPSLPDCTLQVPRFSISATPPNFASFLSPSKVAIKLSCGIHKPICRSRCDGLRVQCAGSNGENDDDDGFYIRRCVELARKAVGFTSPNPLVGCVIVKDGKVVGQGFHPKAGQPHAEVFALRDAGDLAQSATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPIVAFKGVERLRDAGIEVVVGVEEELCKSLNEPYIHRMLTGKPFLTLRYSLSVNGNFMDLLGDGVTDCGGYYSRLLQEYDAVTIKQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00656 258 PANTHER RIBOFLAVIN BIOSYNTHESIS PROTEIN PYRD, CHLOROPLASTIC 48 257 - -
Gma07g00656 258 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 118 156 IPR016192 GO:0008270|GO:0016787
Gma07g00656 258 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 73 168 IPR002125 -
Gma07g00656 258 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 69 191 IPR002125 -
Gma07g00656 258 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 48 257 - -
Gma07g00656 258 Gene3D Cytidine Deaminase, domain 2 60 212 - -
Gma07g00656 258 SUPERFAMILY Cytidine deaminase-like 71 210 IPR016193 GO:0003824
Gma07g00656 258 TIGRFAM eubact_ribD: riboflavin biosynthesis protein RibD 76 228 IPR004794 GO:0008835|GO:0009231
Gma07g00656 258 CDD Riboflavin_deaminase-reductase 75 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00656 Gma-Chr7 6787146 6789291 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00656 K11752 - gmx:100786393 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00656 07 6787146 6789291 Gma07g00656 07 6787146 6789291 ECH