Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00548 ATGCCGACGGGGTTACCGAAGGCGAACTCCTCCGTGGCGCCGGACGACCAGGGATGGTTGTGGACGCAGATCAAGGCGGAGGCGCGCCGTGACGCCGAGTTGGAGCCGGCGCTGGCGAGCTACCTCTACTCGACGATCCTCTCGCACTCGTCGCTCGTGCGCTCTCTGTCTTTTCACCTCGGAAACAAGCTCTGTTCCTCCACGCTCCTCTCCACTCTCCTCTATGACCTGTTCCTGAACGCGTTCTCCTTCGACCCCTCCCTCTGCTCCGCCGCCGTCGCCGACCTCCGCGCCGCCCGCGAACGCGACCCCGCCTGCGTTTCCTACTCCCACTGCCTCCTCAATTACAAAGGCTTCCTCGCTTGCCAGGCGCACCGTGTGGCGCATCTGTTGTGGCGGCAATCGCGGCAGCCATTGGCTTTAGCACTGCACTCTCGCATCGCTGATGTGTTCGCGGTGGACATTCACCCTGCGGCGAGGATCGGGAAGGGGATTCTGTTCGACCATGCCACCGGGGTGGTGGTGGGGGAGACGGCAGTGATCGGGAACAATGTGTCGATCCTGCACCACGTTACGCTGGGTGGGACTGGCAAGGTTGGTGGGGACCGGCATCCCAAGATTGGGGATGGGGTGCTTATTGGTGCCGGTGCTACCATTCTGGGGAATATTAAGATCGGGGAAGGTGCAAAGGTTGGTGCTGGCTCGGTGGTTTTAATCGATGTGCCACCACAGACAACAGCTGTTGGGAACCCAGCCAGGTTGGTTGGTGGGAAGGAGAAGCCCTCTAAGCACGAGGATGTTCCTGGGGAGTCCATGGACCATACTTCCTTTATCTCTGAGTGGTCAGATTATATCATTTGA 861 0.6016 MPTGLPKANSSVAPDDQGWLWTQIKAEARRDAELEPALASYLYSTILSHSSLVRSLSFHLGNKLCSSTLLSTLLYDLFLNAFSFDPSLCSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRQPLALALHSRIADVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPQTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFISEWSDYII 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00548 286 SMART SATase_N_2_a 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma07g00548 286 MobiDBLite consensus disorder prediction 251 273 - -
Gma07g00548 286 SUPERFAMILY Trimeric LpxA-like enzymes 20 256 IPR011004 -
Gma07g00548 286 Gene3D Hexapeptide repeat proteins 154 275 - -
Gma07g00548 286 Gene3D serine acetyltransferase, domain 1 1 153 IPR042122 -
Gma07g00548 286 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 213 241 IPR018357 GO:0016740
Gma07g00548 286 Pfam Hexapeptide repeat of succinyl-transferase 171 187 IPR001451 -
Gma07g00548 286 CDD LbH_SAT 151 251 IPR045304 -
Gma07g00548 286 TIGRFAM cysE: serine O-acetyltransferase 94 253 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gma07g00548 286 PANTHER BNAC03G13300D PROTEIN 15 286 - -
Gma07g00548 286 PANTHER SERINE ACETYLTRANSFERASE 15 286 - -
Gma07g00548 286 Pfam Bacterial transferase hexapeptide (six repeats) 204 237 IPR001451 -
Gma07g00548 286 MobiDBLite consensus disorder prediction 257 271 - -
Gma07g00548 286 Pfam Serine acetyltransferase, N-terminal 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00548 Gma-Chr7 5330991 5332407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00548 20 274 Miscellaneous Gene Families AT2G17640 56.471 2.56e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00548 K00640 - gmx:100815091 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00548 07 5330991 5332407 Gma16g00251 16 2722342 2724168 GST