Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00450 ATGGTTGTGGCTGCGGGTGCTAAGTTCAATTTGAGAAGAGGGAATGGTTCTTCTCATAATGTTGTCAATAGCTATAGCAGTGATGGAGATCTCTGCAGAATTAACAAGAGTGGGTGTTTTTCGTCAGCGGCAGAGGTGGATAGAGACCCTTCTTGTGTTTCATTCACCACTTTCAACATTCTGGCTCCGATTTACAAACGGATTGATCCACAGAACCAAGGCCTACGAGAAAGTGACTTCAGATCATTCTGGTTGGACAGGAATAACAGGATTCTTGATTGCTTGCTTTATGAATCATCTTCTATTATGTGCCTTCAGGAGTTTTGGGTTGGAAATGAAGAACTTGTTAACATGTATGAGGAGAAACTTGGGGATGCTGGCTACCATCTCTTCAAGCTTCCTCGAACCAACAATCGCGGAGATGGCCTGCTGACTGCCATACGTAAAGAATGTCTAAGAGTTATGGATTATAAAGAGTTGCTTTTTAACGATTGTGGTGATCGTGTCGCTCAGTTGTTACATGTTCAGTCAGTTACCCCCTTGTTACAAAACCCAAAAGGCTGTGTTCCCCAAGAGTTTCTGATTGTGAACACCCACTTGTTATTTCCTCATGATTCAAGTCTGTGCGTAGTGAGATTGAATCAGGTTTACCAAATATTGCAATATGTGGAATTGTATCAGAGAGAAAACAGGCTCAAACCCATGCCTATTATACTCTGTGGTGACTGGAATGGAAGTAAGCGTGGACATGTTTACAAGTTCCTTAGGTCACAGGGGTTTGTATCATCATATGATATTGCTAATCGATACAGCGACAGTTATGCAGATGCTCACAAGTGGGTTAGTCACCGAAATCATAGGGGAAATATCTGTGGTGTTGACTTCATTTGGCTTTGCAATCCCAACCAAGCACGTAAACCTTTGAAGACAAGTTGGGCTGAAGCTGTATTTAGTATACTAAAATTCCAGTTACGAAAAGCATCAGTGTCTGAAGATGACGCATTTACCTTTCTGAAGGGTGACAACTATGCTGATTCTGTGACTTATTTTAGTTTTTCTGAAGCACTCCGTCAGGTGAAGTTAGTTGGTGTGCCTTATGGACTATGCTTTCAACAGTTGCAAGACCTATGGAATCAAGCAGATGTTGATGGAAATGGTGTCATCGACTTTGAAGAATTCAAGCAGAAAATATGGAATTCTACATGTCCAGAGCATGTGTTGGAAAATGTGAATGGGTGCATGGAGGATGGTAACACAGAACAGGAGCAAGAAGCCATTGGTTTTAAGGTGAAGAATGCAATGCTGTATCCGCGTGAAGTGGAGAAAGGACTATGGCCAGAAGATTATTCTCTTTCTGATCATGCTAGACTCACAGCTGTGTTTTCAACAGCAAGGATGCGATGTTCTGGCGTACAAAACTGA 1422 0.4198 MVVAAGAKFNLRRGNGSSHNVVNSYSSDGDLCRINKSGCFSSAAEVDRDPSCVSFTTFNILAPIYKRIDPQNQGLRESDFRSFWLDRNNRILDCLLYESSSIMCLQEFWVGNEELVNMYEEKLGDAGYHLFKLPRTNNRGDGLLTAIRKECLRVMDYKELLFNDCGDRVAQLLHVQSVTPLLQNPKGCVPQEFLIVNTHLLFPHDSSLCVVRLNQVYQILQYVELYQRENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANRYSDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWAEAVFSILKFQLRKASVSEDDAFTFLKGDNYADSVTYFSFSEALRQVKLVGVPYGLCFQQLQDLWNQADVDGNGVIDFEEFKQKIWNSTCPEHVLENVNGCMEDGNTEQEQEAIGFKVKNAMLYPREVEKGLWPEDYSLSDHARLTAVFSTARMRCSGVQN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00450 473 Gene3D Endonuclease/exonuclease/phosphatase 39 469 IPR036691 -
Gma07g00450 473 Pfam Endonuclease/Exonuclease/phosphatase family 84 300 IPR005135 GO:0003824
Gma07g00450 473 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 17 469 - -
Gma07g00450 473 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 17 469 - -
Gma07g00450 473 SUPERFAMILY EF-hand 350 398 IPR011992 -
Gma07g00450 473 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
Gma07g00450 473 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Gma07g00450 473 SUPERFAMILY DNase I-like 46 271 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00450 Gma-Chr7 4086009 4090091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00450 118 469 EF-hand Containing Proteins AT1G02270 63.920 1.07e-168 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00450 - - gmx:100777138 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00450 07 4086009 4090091 Gma07g00450 07 4086009 4090091 ECH
Gma07g00450 07 4086009 4090091 Gma16g00147 16 1433476 1437634 GST