Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00392 ATGAGCAGCGTTTTGCAAGGGAAACGCAAGCGCCAGGACTTGGCTTCAAGGCTCTCGGCCTCAATGAATAATGAGGAGGGTCGTGTCTACAACATCATTCGCGGGAGGAAGGAGATGGGGATATGGCAAGGGGACATCAAACGAGAAGCCAACATCCCCGATAGTTTGTTGAAGAAATCCATCAAGATGCTTATCACCAAGAAACTCGTCAAGGAGGTTGTGAACGTGCAGAACAGGTCCAAGAAGTTGTTGATGGCATCGGATTTCGAACCCTCCAATGAGATCAGTGGTGGAGAGTGGTACACCGAAGGCAAACTCGACACAGAATTTATTGACAAGCTGTCTGAGGCTTGCTTTAGTAGTATTCGTCGCCTGAAGGTCGCGACTTGTGAGGGCATCCTTGAGTGGATTAGGAAGGCGGGTGGTGGAGTCAGTAAAGGGCAGATGGAGCAGATTTTGAAGAAGTTGGTTATGGAGAATAAGGTGCAGGAAGTGACTAGTGATGGCTCTGGGGATTTTGAGTCTGTTCCTGTTGGTGAAGTTTGTTATAGATTGGTGAAGAAGGCTGCTGGTGTTGGTGCCATGGCTTCTATTCCTTGTGGGGTTTGTCCTAGGATTAATTCTTGTACACCCGATGGTGTTATCTCCCCTACAACTTGTCAATATTATCAGAAATGGTTGGACTTCTAA 690 0.4739 MSSVLQGKRKRQDLASRLSASMNNEEGRVYNIIRGRKEMGIWQGDIKREANIPDSLLKKSIKMLITKKLVKEVVNVQNRSKKLLMASDFEPSNEISGGEWYTEGKLDTEFIDKLSEACFSSIRRLKVATCEGILEWIRKAGGGVSKGQMEQILKKLVMENKVQEVTSDGSGDFESVPVGEVCYRLVKKAAGVGAMASIPCGVCPRINSCTPDGVISPTTCQYYQKWLDF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00392 229 Pfam RNA polymerase Rpc34 subunit 127 228 IPR007832 GO:0005666|GO:0006383
Gma07g00392 229 Pfam RNA polymerase Rpc34 subunit 19 124 IPR007832 GO:0005666|GO:0006383
Gma07g00392 229 Gene3D - 23 88 IPR036388 -
Gma07g00392 229 PANTHER RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED 6 229 IPR016049 -
Gma07g00392 229 SUPERFAMILY "Winged helix" DNA-binding domain 19 88 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00392 Gma-Chr7 3549340 3550525 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00392 K03025 - gmx:100810279 459.914