Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00352 ATGGCGGAAACCGCTTCACCATCTTCCAAACCCTCACCAATGGACCCTCAAATTCAAAACCCCGCACCCTCCAACTCCAACTCCAACCCTCCAATCCCTTCCCCTTCCCCTTCTCACAACATGGCCTCTCCCTCTCTCCCACCCCTCCCCCAAGACCAACAACAACAACTTCAGCAACAGCTAAGTCCCCCTCAACAACAACAACAACAACAACCTTTGGTTTCTTCGAACAGCATGAACAACATGAACCCTATCTCCAATTTCCAGCTCCAGCAATCCATGCAGCGATCGCCTTCCCTCTCGCGCCTCAATCAGATTCAGCCTCAGCAGACAACGCAGCAGCAGCAGCAGTTTGGTGTCATGCGCCAGCAGGCCGGATTGTACGGCGGACAGATGAGCTTCGCCGCCGCGGGTGGTGCCGGTGCCGCTCAGCAGCAGCAATTGGGAGGGTCGAATCTGTCGCGGTCGGCGTTGATGGGGCAGAGCGGGCACTTCCCCATGCTTTCCGGGGCTGGAACGCAGTTTAATTTACTCTCCTCGCCAAGGCAGAAAGGTGGGCTAGTCCAGTCGTCTCAATTCTCTTCAGGTAATTCTGCTGGACAATCACTGCAAGGAATGCAAGCAATGGGTATGATGGGGTCGCCAAATCTCACCTCGCAACTACGAGCAAATGGAGCCATGGCTTATGCACAGCAGCTGCGTATGAGTCAGGGTCAAATCAGGCAGCAACTATCCCAGCAAGGTTCACTTAACACTGCACAGGTTCAAGGTTTACCAAGGTCATCATCCCTTGCTTTTATGAGTTCTCAGTTGTCTGGGTTGTCTCagaatggacaacctgcaatgattaactctttaacacagcaacagtggcttaagcaaatgccagcaatgtctggccctgccgcaccattgcgtcttcaacaccagaggcagcagcagctgggttcttctacccaattgcaacaaaactccatgaccctgaaccaacagcaattgtcccagctgatgcagcaacagaaatcgatggggcagcctcagctgcttcagcagcaacaacaacagcagcagcagccgcagcctcaacagctgcaacaacagcttatacaacagcagccacaacaacaatctcatctacaagtttcggtccatcaacagcaacagtctccaaggatgccaggacctgcaggccaaaagtcacttAGTCTAACAGGATCACAGCCAGATGTGACTGCATCTGGCGCAACTACACCAGGTGGTAGTTCTAGCCAAGGAACTGAAGCTACAAACCAAGTCCTTGGGAAGAGAAAGATACAAGATTTAGTTGCACAGGTGGATCCACAAGGTAGGCTGGACCCCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTGCAACTACACATGGTTGCATTTTGGCGAAACATAGAAAATCGTCAACTTTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAAATTGGGATTTAACAATTCCCGGATACTCAAGTGAAGAGAAGAAGAATCAGAGCAAACCTCAATTAAATGACCTTCACAAGAGGCGCCTAGATATGGTTCGCACATTGATGGAATCCTCATCCTCTGAGTCGAGTATTAACAGCTCTAAAGAGATGAGTAGACAGGGCATTTCTAATCCTCCCCCTGTAGGAACCCATCATCTAGTAAGACCCTTGAGTCCAGAGCAGTTGGTTTCTCATGCAGCTGGTTCTCAAATGCTACAGCAGATGACAAGGTTTTAA 1773 0.3909 MAETASPSSKPSPMDPQIQNPAPSNSNSNPPIPSPSPSHNMASPSLPPLPQDQQQQLQQQLSPPQQQQQQQPLVSSNSMNNMNPISNFQLQQSMQRSPSLSRLNQIQPQQTTQQQQQFGVMRQQAGLYGGQMSFAAAGGAGAAQQQQLGGSNLSRSALMGQSGHFPMLSGAGTQFNLLSSPRQKGGLVQSSQFSSGNSAGQSLQGMQAMGMMGSPNLTSQLRANGAMAYAQQLRMSQGQIRQQLSQQGSLNTAQVQGLPRSSSLAFMSSQLSGLSQNGQPAMINSLTQQQWLKQMPAMSGPAAPLRLQHQRQQQLGSSTQLQQNSMTLNQQQLSQLMQQQKSMGQPQLLQQQQQQQQQPQPQQLQQQLIQQQPQQQSHLQVSVHQQQQSPRMPGPAGQKSLSLTGSQPDVTASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGRLDPEVIDLLLELADDFIDSATTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKNQSKPQLNDLHKRRLDMVRTLMESSSSESSINSSKEMSRQGISNPPPVGTHHLVRPLSPEQLVSHAAGSQMLQQMTRF 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00352 590 MobiDBLite consensus disorder prediction 45 74 - -
Gma07g00352 590 CDD TAF12 433 501 IPR003228 GO:0005669|GO:0006352
Gma07g00352 590 MobiDBLite consensus disorder prediction 1 25 - -
Gma07g00352 590 MobiDBLite consensus disorder prediction 92 118 - -
Gma07g00352 590 Pfam Transcription initiation factor TFIID subunit A 434 501 IPR003228 GO:0005669|GO:0006352
Gma07g00352 590 MobiDBLite consensus disorder prediction 1 74 - -
Gma07g00352 590 MobiDBLite consensus disorder prediction 26 44 - -
Gma07g00352 590 Gene3D Histone, subunit A 428 503 IPR009072 GO:0046982
Gma07g00352 590 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 9 589 IPR037794 GO:0000124|GO:0005669|GO:0046695
Gma07g00352 590 MobiDBLite consensus disorder prediction 333 432 - -
Gma07g00352 590 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 9 589 - -
Gma07g00352 590 MobiDBLite consensus disorder prediction 533 555 - -
Gma07g00352 590 SUPERFAMILY Histone-fold 431 502 IPR009072 GO:0046982
Gma07g00352 590 MobiDBLite consensus disorder prediction 306 321 - -
Gma07g00352 590 MobiDBLite consensus disorder prediction 297 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00352 Gma-Chr7 3158933 3168008 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00352 K03126 - gmx:100783017 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00352 07 3158933 3168008 Gma07g00352 07 3158933 3168008 ECH
Gma07g00352 07 3158933 3168008 Gma16g00057 16 579871 583364 GST