Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00328 ATGGCATCTCATTTACTCAATCACTCGTCCAAGATGAGAAATGCTTCCAAGTTGCTGCACCACGAACGCGCTCTTTTGGTTCGTTGGTTTTCCGGCGATGCTCAATCCTCTCTCAACCGAAACCGCGATGTGTGGAAAACTCAATTCCACGAGTCTTCAACAACAAGAAGTGTCTTTGAACCGGCCTCCAGCTTTAATAAGAGAAACATCTCCATGGCTACCATTAAAAGAGGTTCCATTATCGGGTTTGGGTTCAATGGAGAAATTTCGCGAAGTTCACAGGTGCTGTCAAGGAGATGCTATGCGTCAGCCTCAGATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGACAGAGGGTAACATTGCAAGATGGTTGAAGAAAGAAGGTGATAAAATCTCTCCTGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCCACTGTTGAAATGGAATGTATGGAGGAAGGTTATCTGGCCAAGATAATCCGCGGGGATGGGGCAAAAGAAATTAAAGTTGGTGAGGTAATTGCTGTAACTGTTGAAGATGAGGGAGATATTGCAAAGTTCAAAGATTATCAACCTTCAGCATCTGAACCAAGTGCAGCCCCTGCCAAAGAAATATCTGCCCCACCTACACCAAAGAAAGAAGAGGAGGTAGAGGAACCTGGCCGAGAACCTGAGCCAAAGGTTTCTAAACCCAGTGCACCACCCTCATCTGGAGATCGCACATTTGCTAGTCCTCTTGCTAGAAAATTGGGCGAAGAGAAAAATGTACCTCTCTCTAGCATTAAAGGAACAGGACCTGAAGGGCTCATTGTGAAGGCCGACATTGATGATTACTTGGCTTCTGGTGCTAAAGAAGTTTCAGCATCCTCCAAGGCCAAGGTTGCAACAGATGCAGCATTGGATTATACTGACATTCCTGTCTCTCAGATACGGAAGGTCACAGCTTCACGGCTACTATTATCAAAACAAACTATTCCTCATTACTATTTAACAGTAGATACATGTGTTGACAAACTCACGAGTTTGCGGACCCAACTCAATTCATTGCAAGAAGCCTCTGGTGGCTCCCGCATATCAGTTAATGACCTTGTAATCAAGGCTGCTGCTTTGGCTCTCCGTAAAGTTCCTCAATGTAACAGTTCATGGGCAAATGATTATATTCGCCAGTATAATAATGTGAATATTAATGTTGCTGTGCAGACTGATAACGGGCTCTTTGTTCCAGTCATCAGGGATGCAGACAAGAAAGGCCTCTCTACAATAGGGGAAGAGGTCAAACAATTGGCAAAGAAAGCCAAAGAAAACAGCTTGAAACCCCAAGATTATGAGGGAGGTACATTTACAGTGTCTAACCTGGGAGGGCCATTTGGTGTCAGACAATTCTGTGCAATCATCAATCCTCCTCAGGCTGGCATTCTTGCCGTTGGATCTTCTGAGAGGAGGGTCGTTCCGGGTTCAGGTGCTGAAGAGTTCAAGTTTGCTTCCTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATGGTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATCCAGAGACCATGTTGTTGTAA 1623 0.4479 MASHLLNHSSKMRNASKLLHHERALLVRWFSGDAQSSLNRNRDVWKTQFHESSTTRSVFEPASSFNKRNISMATIKRGSIIGFGFNGEISRSSQVLSRRCYASASDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKISPGEVLCEVETDKATVEMECMEEGYLAKIIRGDGAKEIKVGEVIAVTVEDEGDIAKFKDYQPSASEPSAAPAKEISAPPTPKKEEEVEEPGREPEPKVSKPSAPPSSGDRTFASPLARKLGEEKNVPLSSIKGTGPEGLIVKADIDDYLASGAKEVSASSKAKVATDAALDYTDIPVSQIRKVTASRLLLSKQTIPHYYLTVDTCVDKLTSLRTQLNSLQEASGGSRISVNDLVIKAAALALRKVPQCNSSWANDYIRQYNNVNINVAVQTDNGLFVPVIRDADKKGLSTIGEEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFGVRQFCAIINPPQAGILAVGSSERRVVPGSGAEEFKFASFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPETMLL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00328 540 MobiDBLite consensus disorder prediction 216 234 - -
Gma07g00328 540 Pfam Biotin-requiring enzyme 112 184 IPR000089 -
Gma07g00328 540 Gene3D - 105 210 - -
Gma07g00328 540 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 243 288 IPR036625 GO:0016746
Gma07g00328 540 ProSiteProfiles Biotinyl/lipoyl domain profile. 110 186 IPR000089 -
Gma07g00328 540 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 250 287 IPR004167 GO:0016746
Gma07g00328 540 TIGRFAM PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 112 540 IPR006257 GO:0004742|GO:0006090|GO:0045254
Gma07g00328 540 Pfam e3 binding domain 250 283 IPR004167 GO:0016746
Gma07g00328 540 Gene3D - 294 538 IPR023213 -
Gma07g00328 540 PANTHER DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX 47 540 - -
Gma07g00328 540 CDD lipoyl_domain 111 184 - -
Gma07g00328 540 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 3 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL 47 540 - -
Gma07g00328 540 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 135 164 IPR003016 -
Gma07g00328 540 SUPERFAMILY Single hybrid motif 109 204 IPR011053 -
Gma07g00328 540 Gene3D - 238 291 IPR036625 GO:0016746
Gma07g00328 540 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 309 540 IPR001078 GO:0016746
Gma07g00328 540 MobiDBLite consensus disorder prediction 199 251 - -
Gma07g00328 540 SUPERFAMILY CoA-dependent acyltransferases 309 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00328 Gma-Chr7 2852933 2858935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00328 2 540 Acyl Lipid Metabolism Gene Families AT1G54220 67.706 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00328 K00627 - gmx:100804938 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00328 07 2852933 2858935 Gma16g00034 16 248653 255829 GST