Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00326 ATGTTTGGCATCTTAGGAGGCAATAAGGGGCACAAGATCAAGGGTACTGTGGTGTTGATGAGCAAGAATGTGTTGGACTTCAACGAAATAGTGTCCACTACTCAGGGTGGTTTGGTTGGTGCTGCCACCGGCATCTTCGGTGCTGCCACCGGTATTGTTGGTGGAGTTGTCGATGGTGCTACTGCCATCTTCAGTCGCAACATTGCCATCCAGTTGATCAGTGCCACCAAGACTGATGGACTTGGAAATGGGAAAGTTGGAAAGCAAACCTATTTGGAGAAACATCTTCCTTCGTTACCAACCTTGGGAGACAGGCAAGATGCATTCAGCGTTTATTTTGAATGGGATAATGATTTTGGAATTCCAGGAGCATTTTACATCAAAAATTTTATGCAATCTGAATTTTTCCTCGTGAGTGTCACTCTTGAAGACATTCCAAATCATGGAACCATTCACTTTGTTTGCAACTCATGGGTTTACAATGCAAAAAGTTACAAAAGGGATCGCATTTTCTTTGCTAATAAGACATATCTTCCAAATGAAACTCCAACTCCACTAGTGAAGTACAGAAAAGAAGAATTGGAAAATCTAAGAGGAGATGGAAAAGGAGAGCGCAAGGAATATGATAGGATCTATGATTATGATGTCTATAATGATTTGGGTAACCCAGACAAGAGCAATGATCTAGCTCGTCCTGTTCTTGGAGGGTCTAGTGCCTATCCATATCCTCGCAGGGGAAGAACTGGTAGAAAACCAACAACAAAAGACCCTAAGAGTGAGTCACCATCCAGCAGCACCTACATCCCAAGAGATGAGAACTTTGGTCACTTGAAGTCATCAGATTTCCTTACATATGGAATAAAATCCATAGCTCAAACCGTTTTACCTACATTTCAATCTGCATTTGGTTTAAATGCCGAGTTTGATAGGTTTGACGACGTGCGTGGACTCTTTGAAGGTGGAATTCATCTCCCTACAGATGCACTCAGTAAAATTAGCCCCCTACCAGTGCTCAAGGAAATCTTCCGCACTGATGGTGAACAAGTCCTCAAGTTTCCACCACCTCATGTCATCAAAGTTAGTAAGTCTGCATGGATGACTGATGAAGAATTTGGAAGAGAGATGCTTGCTGGTGTTAATCCATGCCTAATTGAGTGCCTTCAAGTGTTCCCTCCAAAGAGCAAGCTAGATCCCACAGTGTATGGTGATCAAACTAGTACAATAACCAAAGAACACTTAGAGATCAACCTTGGTGGACTCTCTGTGGAACAGGCACTGAGTGGTAACAGATTGTTCATATTAGATCACCATGATGCATTCATCGCATATCTGAGGAAGATCAATGACCTTCCCACTGCAAAGTCTTATGCCACAAGGACCATCCTTTTCTTGAAAGATGATGGCACCTTAAAGCCATTGGCCATCGAATTAAGTTTGCCACATCCTAGGGGAGATGAGTTTGGTGCCGTTAGTAGAGTCGTCTTGCCCGCAGACCAAGGTGCTGAAAGTACAATTTGGCTAATTGCCAAGGCATATGTTGTTGTCAATGACTCCTGCTATCATCAACTCATGAGCCACTGGTTAAATACTCATGCTGTGATTGAACCATTTGTCATAGCAACAAACAGGCATCTTAGTGTGCTCCACCCTATTTATAAACTTTTGTTGCCTCACTATCGTGACACCATGAACATCAATGGACTCGCAAGACAATCACTCATCAATGCAGGTGGCATTATTGAGCAATCATTTCTGCCTGGGCCATTTGCTGTGGAGATGTCTTCGGCAGTTTACAAGGGGTGGGTTTTCACTGATCAAGCCCTTCCTGCGGATCTTATCAAGAGAGGAATGGCAGTGGAGGATCCATCCTCTCCCTATGGCCTTCGCCTTGTGATAGATGACTACCCTTATGCTGTTGATGGACTAGAGATATGGAGTGCTATCCAGACATGGGTTAAGGACTACGTCTCCTTGTACTATGCCACGGATGATGCAGTTAAGAAAGACTCAGAACTCCAAGCTTGGTGGAAGGAAGCTGTTGAGAAGGGTCACGGTGACTTGAAAGACAAGCCATGGTGGCCTAAGTTGAACACTCTTCAAGATCTGATTCACATTTGCTGCATTATTATATGGACTGCTTCAGCACTCCATGCAGCTGTGAATTTCGGACAATACCCTTATGGCGGTTTCATCCTAAATCGTCCAACTCTAACCAGAAGATTGCTCCCAGAGCCAGGAACCAAAGAATATGGTGAACTTACCAGTAATCATCAAAAGGCTTATTTGAGAACAATTACAGGAAAGACTGAGGCCCTTGTGGACCTAACAGTGATAGAGATATTGTCAAGGCATGCTTCTGATGAGGTCTACCTTGGACAGAGGGACAATCCAAATTGGACTGATGACACAAAGGCAATTCAAGCCTTTAAGAAGTTTGGAAACAAGCTGAAGGAAATTGAGGACAAAATCTCAGGGAGGAACAAGAATTCAAGCCTTAGGAACCGTAATGGACCGGCGCAGATGCCCTACACTGTGCTTCTTCCTACCAGTGGGGAAGGCCTTACTTTCAGAGGAATTCCCAACAGCATCTCTATCTAA 2598 0.4384 MFGILGGNKGHKIKGTVVLMSKNVLDFNEIVSTTQGGLVGAATGIFGAATGIVGGVVDGATAIFSRNIAIQLISATKTDGLGNGKVGKQTYLEKHLPSLPTLGDRQDAFSVYFEWDNDFGIPGAFYIKNFMQSEFFLVSVTLEDIPNHGTIHFVCNSWVYNAKSYKRDRIFFANKTYLPNETPTPLVKYRKEELENLRGDGKGERKEYDRIYDYDVYNDLGNPDKSNDLARPVLGGSSAYPYPRRGRTGRKPTTKDPKSESPSSSTYIPRDENFGHLKSSDFLTYGIKSIAQTVLPTFQSAFGLNAEFDRFDDVRGLFEGGIHLPTDALSKISPLPVLKEIFRTDGEQVLKFPPPHVIKVSKSAWMTDEEFGREMLAGVNPCLIECLQVFPPKSKLDPTVYGDQTSTITKEHLEINLGGLSVEQALSGNRLFILDHHDAFIAYLRKINDLPTAKSYATRTILFLKDDGTLKPLAIELSLPHPRGDEFGAVSRVVLPADQGAESTIWLIAKAYVVVNDSCYHQLMSHWLNTHAVIEPFVIATNRHLSVLHPIYKLLLPHYRDTMNINGLARQSLINAGGIIEQSFLPGPFAVEMSSAVYKGWVFTDQALPADLIKRGMAVEDPSSPYGLRLVIDDYPYAVDGLEIWSAIQTWVKDYVSLYYATDDAVKKDSELQAWWKEAVEKGHGDLKDKPWWPKLNTLQDLIHICCIIIWTASALHAAVNFGQYPYGGFILNRPTLTRRLLPEPGTKEYGELTSNHQKAYLRTITGKTEALVDLTVIEILSRHASDEVYLGQRDNPNWTDDTKAIQAFKKFGNKLKEIEDKISGRNKNSSLRNRNGPAQMPYTVLLPTSGEGLTFRGIPNSISI 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00326 865 PANTHER LIPOXYGENASE 1 865 IPR000907 GO:0016702|GO:0046872
Gma07g00326 865 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 10 177 IPR036392 GO:0005515
Gma07g00326 865 SUPERFAMILY Lipoxigenase 178 865 IPR036226 -
Gma07g00326 865 MobiDBLite consensus disorder prediction 223 272 - -
Gma07g00326 865 Gene3D PLAT/LH2 domain 2 177 - -
Gma07g00326 865 Gene3D - 278 363 IPR027433 -
Gma07g00326 865 Pfam Lipoxygenase 186 848 IPR013819 GO:0016702|GO:0046872
Gma07g00326 865 PRINTS Plant lipoxygenase signature 143 161 IPR001246 GO:0016491
Gma07g00326 865 PRINTS Plant lipoxygenase signature 169 190 IPR001246 GO:0016491
Gma07g00326 865 PRINTS Plant lipoxygenase signature 208 224 IPR001246 GO:0016491
Gma07g00326 865 PRINTS Plant lipoxygenase signature 241 260 IPR001246 GO:0016491
Gma07g00326 865 PRINTS Plant lipoxygenase signature 305 326 IPR001246 GO:0016491
Gma07g00326 865 PRINTS Plant lipoxygenase signature 350 366 IPR001246 GO:0016491
Gma07g00326 865 PRINTS Plant lipoxygenase signature 389 408 IPR001246 GO:0016491
Gma07g00326 865 PRINTS Plant lipoxygenase signature 456 480 IPR001246 GO:0016491
Gma07g00326 865 PRINTS Plant lipoxygenase signature 778 792 IPR001246 GO:0016491
Gma07g00326 865 ProSitePatterns Lipoxygenases iron-binding region signature 1. 521 535 IPR020833 GO:0016702|GO:0046872
Gma07g00326 865 Gene3D - 364 498 - -
Gma07g00326 865 Gene3D - 499 864 - -
Gma07g00326 865 SMART LH2_4 11 174 IPR001024 GO:0005515
Gma07g00326 865 Pfam PLAT/LH2 domain 83 172 IPR001024 GO:0005515
Gma07g00326 865 Gene3D - 178 277 - -
Gma07g00326 865 ProSiteProfiles PLAT domain profile. 46 173 IPR001024 GO:0005515
Gma07g00326 865 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 176 865 IPR013819 GO:0016702|GO:0046872
Gma07g00326 865 MobiDBLite consensus disorder prediction 823 842 - -
Gma07g00326 865 ProSitePatterns Lipoxygenases iron-binding region signature 2. 548 558 IPR020834 GO:0016702|GO:0046872
Gma07g00326 865 PRINTS Lipoxygenase signature 503 520 IPR013819 GO:0016702|GO:0046872
Gma07g00326 865 PRINTS Lipoxygenase signature 521 538 IPR013819 GO:0016702|GO:0046872
Gma07g00326 865 PRINTS Lipoxygenase signature 541 561 IPR013819 GO:0016702|GO:0046872
Gma07g00326 865 PANTHER LIPOXYGENASE 1 865 - -
Gma07g00326 865 CDD PLAT_LH2 11 174 IPR042057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00326 Gma-Chr7 2810283 2816375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00326 1 865 Acyl Lipid Metabolism Gene Families AT1G55020 56.546 0.0 1011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00326 07 2810283 2816375 Gma08g01853 08 16685261 16686865 GST
Gma13g03112 13 45311412 45315621 Gma07g00326 07 2810283 2816375 PCT
Gma15g00252 15 2200951 2206319 Gma07g00326 07 2810283 2816375 PCT
Gma07g00326 07 2810283 2816375 Gma13g03112 13 45311412 45315621 PCT
Gma07g00326 07 2810283 2816375 Gma15g00252 15 2200951 2206319 PCT