Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00279 ATGGCTCTCCTCACCTCCCAACCTAAAAAACCCATTCTCCATCGCTTCACCACCCTTCACCGCCCACTTCCACGCTTAGATAGAACCGTTCTTGGTCTTGGCTCCTTCTCTCACAATACTCTCTCCATTAAAAAATTTAACTTTAACCCAAAGCAAACCAAAATTTCCCTTAAAAACAACCCCTTTACCTATAATTTGGCAGTGACAGCCAAAGCCAATGCCAATGCTGCATTTGGAGAAGGTTTGGAGGCAGGGGAGGTGACATTGAAACACAGAAAGATTTTGTTGTCTGAGGTTGAGGTGAAGAGACAGAGAAGAGTCTTCTTTGGGAGGAAATGGAACTCTTTGGATGTTGGCACTGCTGGAATTGTGTTGGCCATGCATCTCCTTTGCCTCTTTGCTCCTTTCCATTTCAATTGGCCAGCTTTTAGGGTGGCTGTGGCTCTCTATATTGTCACTGGCCTATTTGGCATCACTCTTTCTTTCCATAGGAACCTTTCTCACAGGAGTTTCAAGCTTCCCAAATGGCTTGAATACTTCTTTGCCTATTGTGGGGTCCTGGCTCTTCAGGGGAATCCAATTGACTGGGTGAGCACCCATAGATACCATCACCAGTTTTGTGATTCTGAGAGAGATCCTCATAGCCCAACTGAAGGATTCTGGTTCAGCCATATGAGTTGGCTATTTGATACCAGTTCTGTCATAGAAAGGTGTGGAGAAGCCAACAATGTTGGTGATTTAGAGAAACAATCCTTCTATAGATTTCTCCGAAGCTCTTACCTTGTCCATCCTTTTGCTTTGGGAGCCCTTCTATATGCAGCAGGAGGATTTCCTTTCCTTGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCATATAACCTGGTTTGTAAACTCAGCTTGCCATGTCTGGGGGAATCAGGCATGGAACACCAGGGAATTGTCCAGAAATAATTGGTGGGTGGCGTTGCTTGCATTTGGTGAGGGTTGGCACAATAACCACCATGCTTTTGAGTACTCAGCTAGACATGGACTAGAGTGGTGGCAACTAGACATGACTTGGTACGTTGTGAGATTTCTCGAAGCTATTGGATTGGCCACTGACGTCAAGTTACCCACTGAGAGTCACAAGCAGAAAATGGCACTCAATAGTGATCCAATAGACACATGA 1173 0.451 MALLTSQPKKPILHRFTTLHRPLPRLDRTVLGLGSFSHNTLSIKKFNFNPKQTKISLKNNPFTYNLAVTAKANANAAFGEGLEAGEVTLKHRKILLSEVEVKRQRRVFFGRKWNSLDVGTAGIVLAMHLLCLFAPFHFNWPAFRVAVALYIVTGLFGITLSFHRNLSHRSFKLPKWLEYFFAYCGVLALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMSWLFDTSSVIERCGEANNVGDLEKQSFYRFLRSSYLVHPFALGALLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRELSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLEAIGLATDVKLPTESHKQKMALNSDPIDT 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00279 390 Pfam Fatty acid desaturase 146 359 IPR005804 GO:0006629
Gma07g00279 390 CDD Delta9-FADS-like 139 371 IPR015876 GO:0016717
Gma07g00279 390 PANTHER BNAC05G37460D PROTEIN 70 385 - -
Gma07g00279 390 PANTHER ACYL-COA DESATURASE 70 385 IPR015876 GO:0016717
Gma07g00279 390 PRINTS Fatty acid desaturase family 1 signature 163 183 IPR015876 GO:0016717
Gma07g00279 390 PRINTS Fatty acid desaturase family 1 signature 200 229 IPR015876 GO:0016717
Gma07g00279 390 PRINTS Fatty acid desaturase family 1 signature 285 306 IPR015876 GO:0016717
Gma07g00279 390 PRINTS Fatty acid desaturase family 1 signature 328 342 IPR015876 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00279 Gma-Chr7 2430222 2432094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00279 1 386 Lipid Metabolism Gene Families AT3G15850 62.404 1.03e-174 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00279 K20416 - gmx:100786391 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00279 07 2430222 2432094 Gma07g00279 07 2430222 2432094 ECH
Gma07g00279 07 2430222 2432094 Gma08g01951 08 17487197 17489139 GST