Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00260 ATGgcgtcgcctgaagagtcctctctccgccttcgtccgtcgtcgtcgatcatcgcttatgactgtaatttgaaattgatggattccaacaattggagacctaatcaaggtactaaccccactatggatacaagtgattggagagctcaactaccaattgattcacgccaaagaattgtcaacaaaataatgaagacactaaaaaaacatcttgctgtttctggtcctgatggattgcatgaacttcggaagattgctcaaaggtttgaagacaagatttttactgctgcaacaagccagactgattacctacggaaaatatctttgaagatgcttacaatggagactaaatcccaaaacaccttggctaacaatatgccaccaaatcaagttggccctagccataaacctcctgatcaaggtgatttgaaattgatggattccaacaattggagacctaatcaaggtactaaccccactatggatacaagtgattggagagctcaactaccaattgattcacgccaaagaattgtcaacaaaataatggagacattaaaaaaacatcttcctgtttctggtcctgatggattgcatgaacttcggaagattgctcaaaggtttgaagacaagatttttactgctgcaacaagccagcctgattacctacggaaaatatctttgaagatgcttacaatggagactaaatcccaaaacaccttggctaacaatatgccaccaaatcaagtcggccctagcaataaacctcctgatcaaggacttgttttgcagtctcaagttcataatcttgggcaacaacattctattcctttgcctggtcagctccagccacatcagcagcttctatctcaaaatgttcaaaataatgttgcgtcgcaacctaaccttccacctgtatctagtctagcccagactcccagccaaaatattgtccagaactccaatatacagaatataactgggccaaattcagttgggaccactattagccaaaattccaacttacagaatatgtttcctggttctcagagacaaatgccaggaaggcagcagattgttcccccacagaattcacagcaatatctttaccaacagcagtttaagcagaagctccagcttcaatctcagatgcagcagcaacaacaaaaccttctgcaaccaaatcagttgcaatcttctcagcaatctattatgcaaacttcatctgttatgcagccatccatgatgcaaacatcttctctatctagcataccacagaatcagcagtctactaatgttcaacagccaatgcagtccatgccacagcagcattcacaagttatcaggcatcagcaacaaacagcagtcactcatcagccaagcttaccttcacaacagcaacaacaacttatggggcatcagccaaatacaacaaacatgcaacatgcacagatgcttgggcaacagaacaatgttggtgatatacagcaacCACAGAGGATGCTCTCACAACAGAGTAATCTTACAAACCTGCAACAGAGACAGCAGTTAATAAATCAGCAAAACAACCCAGCAAATATACATCAACAACAATTTGGAAATAATGGCCCTGGGTTACAGCAGCAACATTTGCTCGGACATGAATCTGGCAATGCTGACATGCAAACAAGTCATCACTCTACACACATGTTGCAGCAACCAAAGGTTCCAATGCAGCAACAATCACAACAAAATACATCAAATTTGTTGCTACCTCATTCACAGCAACCACAGCCACTGGGTTCACAACAGCAATTAATGCCACAGATTCACACTCAGTCTGCACAGTTGCAACAGCAATTGGGTTTGCAGCAGCAGCCAAATCCCTCACAACGAGATATGCAGCAAAGAATTCAAGCATCAGGGTCCTTACTTCAACAACAAAATGTTCTTGATCAGAAAAAGCAGTTGTATCAGACTCAAAGAACTCTTCCAGAAACATCAGCAACTTCTCTGGATTCTACAGCACAGACTGCACAACCAAGTGGGGCTGATTGGCAAGAAGAAGTATACCGGAAGCTCCAAACCATGAAAGAAAGTTACTTACCAGAGATGAATGAAATGTATCAAAAAATTGCTAATAAACTTCAGCAGCATGATTCTCTTCCCCAACAGCCGAAGTCAGATCAGATTGATAAATTGAGGGCATATAAAACAATGTTGGAGCGTATGATGGCACTCCTACAGATTCCCAAGAACAACATTTTGCCTAATTTCAAGGAAAAACTGGGATCATATGAGAAGCAAATTATAAATCTCATAAATTCAAATAGACCCAGGAAAGGCATGAATTCAGTACAGGCAGGACAGCTCCCCCCAACTCATATGTCCTCCATGCAACAGCCACAATCCCAAGTTACTCAAGTACATTCTCATGAAAACCAAATGAACCCTCAATTGCAGTCAACAAATTTACAGGGTTCTGTACCAACCATGCAGCAGAATAATATTGCAAGCTTGCAGCACAATGCTTTGGCTGGTGTATCAACAGGACAACAGAATATGATGAATTCAATGCAACCTGTAACTAATTTAGATTCTGGACATGGAAATTCTATGAACTCCCTTCAACAGGTTCCAATGAGCTCCCTCCAACAAAACCCTGTTAGTACTCCTCAACAGACTAACATTAATTCCTTACCATCACAAGGTGGGGCAAATATGATTcaaccaaatgcccttcagtcaggttccagtgcacttcaacaccaactgaaacatcagcaagaacagcagatgctgcagagtcaacaattcaaacaacaatatcagcagcgacaacaattgatgcagaggcagcagctcctgcagcagcagcaactacaccatccagcaaagccacagctatcttcacaattgcagacacatcaAATGCCCCAACTTCACCAAATGAATGATATAAATGATATAAAAATGCGACAAGGAATGGGTGTTAAGTCAGGTGTCTTTCAGCAGCATCTTACATCAGGTCAACACTCAACATATTCCCATCAACAGCTGAAACAAGGGAGTGCATTTCCTGTTTCTTCACCCCAACTCCTTCAGGCTGCATCTCCTCAGATTCAGCAACACTCATCTCCCCAGGTTGACCAACAAAATCATCTCCCATCCAAAGCAAAAGTCACAACTCCTCTGCAATCTTCTAATTCACCCTTTGTGGGACCTACCCCTTCACCTCCCTTGGCTCCATCTCCTATGCCAGGAGAATCTGAGAAGCCTATTCCTTGTGTTTCATCAATATCAAATGCTGCAAATATTGGACATCAACAAACAGGGGGTGCAATAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCTTTATTGGCAGAATTCAGTGCTCCTGATGGTGCGCATGGTAATGCTTTAGCTGCCACTTCTGGGAAGTCAACTGTTACAGAGCAGCCTCTTGAACGCCTAATTAATGCGGTGAAATCAATGTCAAGTAAAGCATTAAGTGCTGCAGTCATGGATATTGGTTCAGTTGTCAGCATGAATGATAGAATTGCAGGATCAGCTCCAGGTAATGGATCCAGAGCGGCTGTTGGTGAGGATTTGGTTTCCATGACTAATTGTCGTCTACAGGCTAGAAATTTCATTACTCAAGATGGTTCCAATGGAATTAAGAGGATGAAACGTTACACCAGTGCTATACCCTTGAATGTTGTACCATCTGCTGGTAGCATGAATGATAGTATCAAGCAGTTAACTGCTTCAGAGACTTCTGATCTGGAGTCAACTGCAACATCCAGTGTCAAGAAACCAAAGATTGAGGTTAATCATGCCCTTTTGGAAGAAATAAGGGAGATTAACCACCAACTTATTGACACGGTAGTAGACATAAGCAATGAAGATGTTGATCCAACAGCTGCTGTTGCTGCTGCTGAAGGGGCAGAAGGGATCATTGTCAAATGCTCTTTCATTGCCGTGGCTCTCAGCCCTAGCTTAAAATCCCAATATGCTTCAGCACAGATGTCACCTATTCAGCCCCTGCGTTTGCTGGTTCCTGCAAATTATCCTAATTGTTCTCCCATACTCCTAGACAAATTTCCAGTTGAATCCAGTAAGGAGAATGAAGATCTTTCAGTGAAAGCAAGGTCAAAGTTTAGCACATCTTTACGCAGTTTATCACAACCTATGTCACTTGGGGAGATAGCAAGGACTTGGGATGTTTGTGCTCGCCGTGTTATTTCTGAGCATGCACAACAGAGTGGGGGAGGAAGCTTCAGCTCTAAGTATGGAACTTGGGAGAATTGCTTGACCACCAACTAA 4326 0.2598 MASPEESSLRLRPSSSIIAYDCNLKLMDSNNWRPNQGTNPTMDTSDWRAQLPIDSRQRIVNKIMKTLKKHLAVSGPDGLHELRKIAQRFEDKIFTAATSQTDYLRKISLKMLTMETKSQNTLANNMPPNQVGPSHKPPDQGDLKLMDSNNWRPNQGTNPTMDTSDWRAQLPIDSRQRIVNKIMETLKKHLPVSGPDGLHELRKIAQRFEDKIFTAATSQPDYLRKISLKMLTMETKSQNTLANNMPPNQVGPSNKPPDQGLVLQSQVHNLGQQHSIPLPGQLQPHQQLLSQNVQNNVASQPNLPPVSSLAQTPSQNIVQNSNIQNITGPNSVGTTISQNSNLQNMFPGSQRQMPGRQQIVPPQNSQQYLYQQQFKQKLQLQSQMQQQQQNLLQPNQLQSSQQSIMQTSSVMQPSMMQTSSLSSIPQNQQSTNVQQPMQSMPQQHSQVIRHQQQTAVTHQPSLPSQQQQQLMGHQPNTTNMQHAQMLGQQNNVGDIQQPQRMLSQQSNLTNLQQRQQLINQQNNPANIHQQQFGNNGPGLQQQHLLGHESGNADMQTSHHSTHMLQQPKVPMQQQSQQNTSNLLLPHSQQPQPLGSQQQLMPQIHTQSAQLQQQLGLQQQPNPSQRDMQQRIQASGSLLQQQNVLDQKKQLYQTQRTLPETSATSLDSTAQTAQPSGADWQEEVYRKLQTMKESYLPEMNEMYQKIANKLQQHDSLPQQPKSDQIDKLRAYKTMLERMMALLQIPKNNILPNFKEKLGSYEKQIINLINSNRPRKGMNSVQAGQLPPTHMSSMQQPQSQVTQVHSHENQMNPQLQSTNLQGSVPTMQQNNIASLQHNALAGVSTGQQNMMNSMQPVTNLDSGHGNSMNSLQQVPMSSLQQNPVSTPQQTNINSLPSQGGANMIQPNALQSGSSALQHQLKHQQEQQMLQSQQFKQQYQQRQQLMQRQQLLQQQQLHHPAKPQLSSQLQTHQMPQLHQMNDINDIKMRQGMGVKSGVFQQHLTSGQHSTYSHQQLKQGSAFPVSSPQLLQAASPQIQQHSSPQVDQQNHLPSKAKVTTPLQSSNSPFVGPTPSPPLAPSPMPGESEKPIPCVSSISNAANIGHQQTGGAIAPAQSLAIGTPGISASPLLAEFSAPDGAHGNALAATSGKSTVTEQPLERLINAVKSMSSKALSAAVMDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGSNGIKRMKRYTSAIPLNVVPSAGSMNDSIKQLTASETSDLESTATSSVKKPKIEVNHALLEEIREINHQLIDTVVDISNEDVDPTAAVAAAEGAEGIIVKCSFIAVALSPSLKSQYASAQMSPIQPLRLLVPANYPNCSPILLDKFPVESSKENEDLSVKARSKFSTSLRSLSQPMSLGEIARTWDVCARRVISEHAQQSGGGSFSSKYGTWENCLTTN 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00260 1441 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 146 1440 IPR044661 GO:0003713|GO:0031490
Gma07g00260 1441 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 27 141 IPR044661 GO:0003713|GO:0031490
Gma07g00260 1441 SUPERFAMILY Kix domain of CBP (creb binding protein) 44 118 IPR036529 GO:0003712|GO:0006355
Gma07g00260 1441 MobiDBLite consensus disorder prediction 550 629 - -
Gma07g00260 1441 MobiDBLite consensus disorder prediction 948 970 - -
Gma07g00260 1441 Coils Coil 370 390 - -
Gma07g00260 1441 MobiDBLite consensus disorder prediction 1028 1065 - -
Gma07g00260 1441 MobiDBLite consensus disorder prediction 851 904 - -
Gma07g00260 1441 MobiDBLite consensus disorder prediction 391 473 - -
Gma07g00260 1441 MobiDBLite consensus disorder prediction 658 677 - -
Gma07g00260 1441 Pfam KIX domain 164 243 IPR036546 -
Gma07g00260 1441 Pfam KIX domain 45 124 IPR036546 -
Gma07g00260 1441 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 146 1440 - -
Gma07g00260 1441 MobiDBLite consensus disorder prediction 1028 1084 - -
Gma07g00260 1441 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 27 141 - -
Gma07g00260 1441 MobiDBLite consensus disorder prediction 1066 1083 - -
Gma07g00260 1441 MobiDBLite consensus disorder prediction 240 261 - -
Gma07g00260 1441 Gene3D Coactivator CBP, KIX domain 46 124 IPR036529 GO:0003712|GO:0006355
Gma07g00260 1441 Gene3D Coactivator CBP, KIX domain 165 243 IPR036529 GO:0003712|GO:0006355
Gma07g00260 1441 SUPERFAMILY Kix domain of CBP (creb binding protein) 163 237 IPR036529 GO:0003712|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00260 Gma-Chr7 2239243 2264347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00260 K14972 - gmx:100805336 2108.18