Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00247 ATGGCCATTGTTCTCCGTCTTGGAAGCAGAAGCAGAAGCAAAGGGAACCACCCTTCTTCTCATATCGTGTTCTTctccacctccaattccaattccaactccaactccaactccaaTTCTCCTTTCTCTGACCTCTTCAGTGAAATCAAAAACAATTTCAAAGAATCCTCTCCCTCTCCTTCAAACACCCCGCGCTCCTCGAATTTCCGCGACGAGATCAACAAAAACCTCCATGAATTCCGCGCCCGGACCACCGCGCCTCCGCCGCAGCAGCAGCAAATCTCGTTCCAGAAAATCTACCAGGAAAACATGAACCGGAACCCGCCCAACTCCTCTTCCTTCAACTTCAATTCCATTCGCGACAGCCTAAAAAACATCAAGCCCGCCGCCCAGACCACCCAAACCTGGTCGCGCCCAATGCCTTCCACCACCAGCGGCTCCTTTTTGGGGAAGGAAGTGAGCAGCGACGGCTCTCCAGCGTCGTCGTCGTCGTCGTTGTCGTTCTTGAGGACTTACAGCGTGGATGATTTGGGGGAGAAATTGAGGATGTTGAGGCCGGAGGGAATGAGAAATGATTGGTTTTCTGTGAGGGAGTTGAGTGAGAGGCTTAGAAGGTTGAGGAAGATGGAGGAGGAGGAGGTGGAGAAGCAAGCCCATTCCAATACCCAATACGGTTTCAATAAAGCTGTGCTAGATCATGTCAGAGGATCCCTCGCTCAGTTGGATCAAAATCAAACTGAGGCCGCTAAGAAAGCTTCACGCCAGGGACTTAGTATATTGAGCCACTTGAATGGGACTCCAACCTTCTCCCTCGACCCTCCCAAACCCCACCTTGTTGAAAAGTACTTTCATCCGGATAATATGTCCTCCTCCGAGAAGTTGAAAATCGAGCTTGCCAAGGTTAGAGATGAGTTTAAAATGTCCGACTCCGATTGCGGTTCTGCGCGTGTTCAAATTGCACAACTCACAACAAAGATTAAGCATCTATCAGCAGTTCTACACAAGAAGGATGTTCATTCTCGTAAAGGTTTGCTAGCAATGGTTCAGAGGAGAAAAAGATTACTGAAATACCTCAGAAGAACTGATTGGGATTCCTATTGTTTTGTTATCTCCAAGCTGGGTCTACGTGATAATCCCGATCATATTTATAGAGCTCGATCTGGTACGGCGACATAG 1176 0.4677 MAIVLRLGSRSRSKGNHPSSHIVFFSTSNSNSNSNSNSNSPFSDLFSEIKNNFKESSPSPSNTPRSSNFRDEINKNLHEFRARTTAPPPQQQQISFQKIYQENMNRNPPNSSSFNFNSIRDSLKNIKPAAQTTQTWSRPMPSTTSGSFLGKEVSSDGSPASSSSSLSFLRTYSVDDLGEKLRMLRPEGMRNDWFSVRELSERLRRLRKMEEEEVEKQAHSNTQYGFNKAVLDHVRGSLAQLDQNQTEAAKKASRQGLSILSHLNGTPTFSLDPPKPHLVEKYFHPDNMSSSEKLKIELAKVRDEFKMSDSDCGSARVQIAQLTTKIKHLSAVLHKKDVHSRKGLLAMVQRRKRLLKYLRRTDWDSYCFVISKLGLRDNPDHIYRARSGTAT 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00247 391 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 389 - -
Gma07g00247 391 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 389 - -
Gma07g00247 391 SUPERFAMILY S15/NS1 RNA-binding domain 298 377 IPR009068 -
Gma07g00247 391 Coils Coil 196 216 - -
Gma07g00247 391 Hamap 30S ribosomal protein S15 [rpsO]. 288 377 IPR005290 GO:0003735|GO:0005840|GO:0006412
Gma07g00247 391 Pfam Ribosomal protein S15 300 376 IPR000589 GO:0003735|GO:0005840|GO:0006412
Gma07g00247 391 Gene3D - 293 341 - -
Gma07g00247 391 TIGRFAM S15_bact: ribosomal protein uS15 299 376 IPR005290 GO:0003735|GO:0005840|GO:0006412
Gma07g00247 391 Gene3D - 343 378 - -
Gma07g00247 391 SMART Ribosomal_S15_2 298 376 IPR000589 GO:0003735|GO:0005840|GO:0006412
Gma07g00247 391 MobiDBLite consensus disorder prediction 130 165 - -
Gma07g00247 391 CDD Ribosomal_S15p_S13e 300 374 IPR000589 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00247 Gma-Chr7 2099342 2102016 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00247 - - gmx:100820600 657.521