Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00229 ATGCCGCTGGTATTAGCGAAAAGCGATTCGATCCAGATTCGCGAGGTATGGAACGATAACCTGGAAGAGGAGTTCGCGTTGATTCGCGAAATTGTGGACGATTACCCTTACATCGCCATGGACACGGAGTTTCCAGGGATCGTTCTCCGACCTGTGGGGAATTTCAAGAACAGCTACGATTACCATTACCAAACCCTAAAGGACAACGTCGACATGCTCAAACTCATCCAATTGGGCCTCACTTTCTCCGACGAGCACGGCAACCTTCCCACGTGCGGCGACGAATCCGGCACGTGCTGCATCTGGCAATTCAACTTTCGCGAATTCAACGTTAACGAGGACGTCTTCGCCAACGACTCCATCGAGCTCTTGCGGCAGAGCGGGATTGATTTCAAGAGGAACAACGAAAACGGCATCGACGCCCACCGTTTCGGGGAGCTTCTCATGTCCTCCGGGATCGTCTTGAATGACAACGTTCATTGGGTTACTTTCCACAGCGGTTACGATTTCGGGTACTTGTTGAAGCTCTTGACGTGTCAGGATTTGCCCGATACACAAGTGGGCTTCTTCAATTTGATAAACATGTATTTCCCAACTGTGTACGACATAAAACACCTCATGAAGTTTTGCAACAGCCTCCATGGAGGCTTGAACAAGCTTGCCGAGTTGTTGGAGGTCGAGAGGGTTGGGATTTGCCATCAGGCCGGTTCCGATAGCTTGCTCACTTCCTGTACATTCAGGAAATTGAAGGACAATTTCTTTAGTGGCTCCTTGGAGAAGTATGCAGGTGTCTTGTATGGGTTAGGTGTTGAGAATGGACAGGGTTCTCATTGA 834 0.4952 MPLVLAKSDSIQIREVWNDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYDYHYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGDESGTCCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKRNNENGIDAHRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCQDLPDTQVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKDNFFSGSLEKYAGVLYGLGVENGQGSH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00229 277 Pfam CAF1 family ribonuclease 16 139 IPR006941 -
Gma07g00229 277 Pfam CAF1 family ribonuclease 162 222 IPR006941 -
Gma07g00229 277 SUPERFAMILY Ribonuclease H-like 5 270 IPR012337 -
Gma07g00229 277 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4 276 IPR039637 GO:0004535|GO:0030014
Gma07g00229 277 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 6-RELATED 4 276 - -
Gma07g00229 277 Gene3D - 1 272 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00229 Gma-Chr7 1888766 1889998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00229 K12581 - gmx:100789409 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00229 07 1888766 1889998 Gma08g01998 08 17982804 17984186 GST