Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00215 ATGGTGATGGGCATTTCATCTCCATCTTACAAGCTGAAATTCCTTCGTCCTCGCCAACTTGAACCTCTTTCTTTGACTCCGCCATCATCTTCATTCAGAGCGTTGGAGTTGAAAGAGAAGGTTCAGCCTCTGATCCCATGGCCGGTGTCTCCCTTTACAAACCTAAATCCTACGAATTCCCTCTCTTATGCTCTTCAAGACGGCAAAATTCGCCTCGAAATCGATTTCCCGCCTTTGCCCAGTAACATTTCTTCTTATAAGGGATCTTCAGATGAGTTCATTGATGCCAACGTTCAACTTGCCTTGGCTGTTGTACAAAAGCTAAAGAAAGAAACCAGAACGCAGAGCCTTCAAAAGGAAATACACACTTATTTTCATATTGATGGCATTACCATAGATGACAATGAAGGTCGTTGGCAATCTACTGAGCCTCCATCACTCtacatattcattaactgcagtacacgtgaacttgtgtatatagagaagtatgtgTGCAGATTTAGGCCTTCCGGGCTTCCCAGCCAAAGATTTGCAGTACCGCTTTCTTTCTCAATTCACTCCATCCGAATCAGAGAGTATTCAAAGACAGTTGCAATAGCACCTTATATTGTCAATTACAATGGAGCTGTATTCTGCCAGTACCCAGGTCCTTGGCAGGTGATGCTTAAACAAGCAGATGGTTCTTATGCTTGCATAGCAGAAAGTGCAAACTGCTTCAGCCTTGGCGAGGCCAAAGAGGAATTGTTGAGGGTCTTGGGACTTCAAGAAGAAGAGGGAAGTTCTCTAGAATTTCTTCGAAGAGGCTACAAGGCAAGCACGTGGTGGGAAGAAGATTTTGATTCAGAAGTATCTTATGGATGGCGGAGTTGA 873 0.417 MVMGISSPSYKLKFLRPRQLEPLSLTPPSSSFRALELKEKVQPLIPWPVSPFTNLNPTNSLSYALQDGKIRLEIDFPPLPSNISSYKGSSDEFIDANVQLALAVVQKLKKETRTQSLQKEIHTYFHIDGITIDDNEGRWQSTEPPSLYIFINCSTRELVYIEKYVCRFRPSGLPSQRFAVPLSFSIHSIRIREYSKTVAIAPYIVNYNGAVFCQYPGPWQVMLKQADGSYACIAESANCFSLGEAKEELLRVLGLQEEEGSSLEFLRRGYKASTWWEEDFDSEVSYGWRS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00215 290 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 128 290 IPR044687 -
Gma07g00215 290 Pfam Domain of unknown function (DUF1995) 59 165 IPR018962 -
Gma07g00215 290 Pfam Domain of unknown function (DUF1995) 185 246 IPR018962 -
Gma07g00215 290 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 33 116 IPR044687 -
Gma07g00215 290 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 33 116 - -
Gma07g00215 290 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 128 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00215 Gma-Chr7 1767804 1772154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00215 - - gmx:100803725 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00215 07 1767804 1772154 Gma07g00215 07 1767804 1772154 ECH
Gma07g00215 07 1767804 1772154 Gma08g02015 08 18142913 18155659 GST