Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00143 ATGGGGGGCTCTGAAGGGGTGGGAGCATCGTCGAAGCAATTCGGTGTCACAAAGCCCATATCAATGGCTGGCCCATCGGCTACTGATTTGCAAAGGACTCGTGAGTTAGAGAAGTTTCTCGCTGTTTCGGGGCTTTACGAGAGCAAGGATGAAGCTGCCAAGAGGGAAGAGGTTCTTCACCGGCTTGGAGAGATAGTTAAAAGTTGGGTGAAGCAACTGACCCGCCTTAGGGGATACACTGGTCAAATGGTGGAGGATGCAAATGCTATCATTTTGACTTTTGGTTCTTATCGGCTTGGTGTTCATGGTCCTGGGGCTGACTTGGACACTTTATGCATTGGGCCGTCCTATGTAACCCGAGAGGAGGATTTTTTCTACACATTGCATGATATCTTAGCTAACGTGGAGGAAGTCACAGAATTGCAACCAATTCCGGATGCTCATGTCCCAGTTATGAAATTCAAGTTTGATGGAATATCAATTGACCTCCTCTATGCCAGTATTTCTAGATTGGTTTTACCTGAAGACTTGGATATATCTGATGTCTCTGTTCTACACAATGTTGATGAGCCTACCGTGCGAAGTTTGAATGGCTGTAGGGTTGCAGATCAAATTCTAAAGCTTGTTCCTAATATTGAGCACTTTCGTACAACACTTCGCTGCTTGAAATTTTGGGCCAAAAGGCGAGGCATTTATTCTAATGTGACTGGTTTTCTAGGTGGTGTTAACTTGGCACTTCTTGTAGCCCGAGTGTGCCAGTTTTATCCGAATGCAGTTCCAAGTATGCTTGTTTCCAGATTCTTCAGGGTATATACACAGTGGCGGTGGCCAACTCCTGTCATGTTATGTCCAATAGAGGAGAATGAGCTTGGGTTTCCTGTTTGGCATCCTGGTAAAAATCCCCGTGACAGATCCCATCATATGCCAATCATTACTCCTGCCTATCCCTGTATGAATTCTAGTTATAATGTTTCTACGAGCACCCTTCGTGTAATGATGGACCAGTTCCAATATGGCAACAAGATCTGTGGGGAAATAGAATTGAGTAGAGCTTGTTGGAAGGCTCTGTTTGAACAGTACAGTTTCTTTGAAAGCTATAAAAACTACTTGCAAGTTGACGTAGTTGCTGCTGATGCCGATGACTTGCGCAGTTGGAAAGGTTGGGTGGAATCACGGCTTCGCCAGCTGACTTTGATGATTGAACGTGACACTTTTGGGAAGTTGCAATGTCATCCCTATCATCATGAGTTTGTGGATACTTCAAGGCAGTGTGCACATTGTGCTTTCTTTATGGGTTTGCAGAGGAAACAGGGAGAGGTTGTTCAAGAAGGTCAGCAATTTGATATACGAGGGACAGTTGAAGAATTTCGGCATTCTGTTAATATGTACATGTTCTGGAAACCGGGGATGGAGATTTATGTTTCTCATGTTCGTAGAAGGCAAATTCCATTCTATGTTGTTCCTGATGGTTATAAACGATCTCGGCTATCAAGGCCAACATCACAAGTTGAGAATTGTAAATCATTTCATAATGAGGTTTCGGGGACTGAACATGTTGAGAGAATCCGTAAGAGGAAGAACAATGACGGTGTGGATGTGAGGGGGGATGCTATAGTTAAAAGGCAATCTGCTAGTCCTTCGGAAGATAGATTGGCAAGACACAGCAGCCTTGGTACTGGTGGTTTGTCTGTTGAAGCTGTATCTGATAGACAAGAGTTGAGAAATGTTGAGTGCAATCATTTGTCAAACAGTGGGCAAGATGAGTTGGATAGAACAGAGTCTCCAGAAGCTGCTTCAAATTCTAGTGTGATTACATCTGTTGGTTCTTCTGAAGATACTGGATCTGTAACAGTGGCAGGATGTGTTGAGGAAAGCACCGGGGGTGTTGAAATGATGAACAATGGCTGGTTTGAGGATAGCACTTATGGGAATGATTCTGTCACACTGGTGAAAAATATAGTGGCAAGTGGAAATGAAGTGTTTCAACATGAGCTACAGGAGCAGTTTCAGCCGAATGCAACGCTAGGGATGGTTCTTGATTCTGCAGAAAAGGTTATTTCAGAAGTTGTGCAAGAGCCGGTGATAAGGAGATTGAGACTATCATCGACAGTAAACCGTTGGTTGTGCGTTAAGTCCGAGAAAGCAAAACTGAGGAAGGTGGTGGTGTGTGCTACGGTGATTGGAGCGTGCACGGAGGCCGCGGCGGCGGCGGTGCATAGGAACGTGAGGAAATGTCAACGGTGGGGAAGGGCAGTAGAAATATTGAAGGAGTTGGAGGAGAAGATTGCGAAGCCAACGTGGAAGCTGAAGCTGAAGCTGGTTGTGGATGCCATGAACGTTGAGATGCACGCTGGTCTTGCTTCCGAAGGTGGTAGCAAGCTCAAGATGCTCATCACTTACGTTGCTAAGCTCCCAACAGGGAATGAGGAAGGACTATATTATGCATTGGATCTTGGAGGGACTAATGTTCGCATGTTACGTGTGCAATTGGGAGACAAGGATGTTGGTATTATTAGTCAAGAAATCACCGAGGTGTCAATTCCTCCTAATTTGATGGTTGGGACATCAGATGCAAGCTTTTTTTTCCTTACCAGTTTGAAATTCCTTCTGCCTACCAGCGATTTTCAAGTGTCTCCTGGTAGGCAGAGAGAGCTAGGTTTTACCTTTTCCTTTCCTGTCATGCAAACGTCTCTTGCTTCTGGGAACCTTATCAAGTGGACAAAAGGCTTCAACATAGATGGCACATGTTGTTGTTTAAATAGGTTTGGTCAATATGTTGTGGCAGAATTAACAAAAGTAATTCAGAGACAAGGCCTTGACATGTGTGTAACTGCTCTGAGCAATGCTATTATTTTAGGTACTGGTACAAATGCAGCCTATGTGGAACGTGTTCCAGCAATACAAAAATGGCACGGTCCTTTGCCAGATTCTGGAGATATGGCTATCAACATGGAGTGGGGAAAATTCCGGTCATCACACCTTCCATTGACTGAGTATGATTGTGCATTAGATGCCGAGAGTTTAAATCCTAGTGATCAGATTTTTGAGAAGATGACGTCTGGCTTGTACTTGGGAGAAATTGTTCGTATAgtgtttcagtacaagtgtgagATATCTGATACCTCCCTGGAAGTGAGGAAGGTGGTTGTTGAGATCTGCAATATTATTGCCACACGTGGTGCTCGTCTTTCTGCTGCTGGAATCTTAGGTATCCTGAAGAAGTTGGGAAAAGACACCATCAGTGAAGTTGTGGGTCAGAAGAATGTGATAGCCATGGATGGTGGATTGTTTGAGCATTACACTGAGTACACCGAGTGCTTAGAGAATACCCTTAAAGAGTTGGTTGGTGAAGATATCTCCGAAAggcctgacatgcctaaaaagccaatgatgtatggagcatttcaagagttatcaatgaaaaaaggatttcctttcagGAGAATTCTGCAATTTTCTCTTGTTAGCCTTAACATCATTCAGTATCATATTTCACATCAACTGGTCCAATACTTTGGTTAG 3522 0.429 MGGSEGVGASSKQFGVTKPISMAGPSATDLQRTRELEKFLAVSGLYESKDEAAKREEVLHRLGEIVKSWVKQLTRLRGYTGQMVEDANAIILTFGSYRLGVHGPGADLDTLCIGPSYVTREEDFFYTLHDILANVEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLVLPEDLDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQFYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQYSFFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCAFFMGLQRKQGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPFYVVPDGYKRSRLSRPTSQVENCKSFHNEVSGTEHVERIRKRKNNDGVDVRGDAIVKRQSASPSEDRLARHSSLGTGGLSVEAVSDRQELRNVECNHLSNSGQDELDRTESPEAASNSSVITSVGSSEDTGSVTVAGCVEESTGGVEMMNNGWFEDSTYGNDSVTLVKNIVASGNEVFQHELQEQFQPNATLGMVLDSAEKVISEVVQEPVIRRLRLSSTVNRWLCVKSEKAKLRKVVVCATVIGACTEAAAAAVHRNVRKCQRWGRAVEILKELEEKIAKPTWKLKLKLVVDAMNVEMHAGLASEGGSKLKMLITYVAKLPTGNEEGLYYALDLGGTNVRMLRVQLGDKDVGIISQEITEVSIPPNLMVGTSDASFFFLTSLKFLLPTSDFQVSPGRQRELGFTFSFPVMQTSLASGNLIKWTKGFNIDGTCCCLNRFGQYVVAELTKVIQRQGLDMCVTALSNAIILGTGTNAAYVERVPAIQKWHGPLPDSGDMAINMEWGKFRSSHLPLTEYDCALDAESLNPSDQIFEKMTSGLYLGEIVRIVFQYKCEISDTSLEVRKVVVEICNIIATRGARLSAAGILGILKKLGKDTISEVVGQKNVIAMDGGLFEHYTEYTECLENTLKELVGEDISERPDMPKKPMMYGAFQELSMKKGFPFRRILQFSLVSLNIIQYHISHQLVQYFG 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00143 1173 SUPERFAMILY PAP/OAS1 substrate-binding domain 210 358 - -
Gma07g00143 1173 CDD NT_PAP_TUTase 54 209 - -
Gma07g00143 1173 SUPERFAMILY Actin-like ATPase domain 949 1126 IPR043129 -
Gma07g00143 1173 Gene3D Beta Polymerase, domain 2 47 203 IPR043519 -
Gma07g00143 1173 Gene3D - 808 944 - -
Gma07g00143 1173 PANTHER POLY A POLYMERASE 1 599 - -
Gma07g00143 1173 Pfam Hexokinase 769 948 IPR022672 GO:0005524|GO:0005975|GO:0016773
Gma07g00143 1173 Gene3D - 15 357 - -
Gma07g00143 1173 MobiDBLite consensus disorder prediction 595 615 - -
Gma07g00143 1173 Gene3D Poly(A) polymerase predicted RNA binding domain 361 477 - -
Gma07g00143 1173 Gene3D - 737 805 - -
Gma07g00143 1173 Gene3D - 1035 1125 - -
Gma07g00143 1173 SUPERFAMILY Nucleotidyltransferase 14 208 IPR043519 -
Gma07g00143 1173 Pfam Nucleotidyltransferase domain 89 160 IPR002934 GO:0016779
Gma07g00143 1173 SUPERFAMILY Actin-like ATPase domain 743 959 IPR043129 -
Gma07g00143 1173 Pfam Hexokinase 949 1032 IPR022673 GO:0005524|GO:0005975|GO:0016773
Gma07g00143 1173 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 360 487 IPR011068 GO:0003723|GO:0016779|GO:0031123
Gma07g00143 1173 Gene3D - 945 1034 - -
Gma07g00143 1173 PANTHER NUCLEAR POLY(A) POLYMERASE 4 1 599 - -
Gma07g00143 1173 MobiDBLite consensus disorder prediction 580 615 - -
Gma07g00143 1173 Pfam Poly(A) polymerase central domain 15 359 IPR007012 GO:0004652|GO:0043631
Gma07g00143 1173 ProSiteProfiles Hexokinase domain profile. 751 1173 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gma07g00143 1173 Pfam Poly(A) polymerase predicted RNA binding domain 361 420 IPR007010 GO:0003723|GO:0043631
Gma07g00143 1173 PRINTS Hexokinase family signature 814 830 - -
Gma07g00143 1173 PRINTS Hexokinase family signature 1013 1035 - -
Gma07g00143 1173 PRINTS Hexokinase family signature 885 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00143 Gma-Chr7 1205676 1220619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00143 K14376 - gmx:100798218 1404.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00143 07 1205676 1220619 Gma07g00143 07 1205676 1220619 ECH
Gma07g00143 07 1205676 1220619 Gma08g01840 08 16513775 16519769 GST