Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00117 ATGTTGTTTCCAACCAGTGGAGTAAGGATGAATTCTGCAATGGATGATATGAATTTGATTCAGCAAACCCAGAGACATCACTTGGTTGTGAGGGAGATTGGCGAGGAGATTGATTTAGAAATAGGAGCTGGGGAGGATGACCCGTCATTTGGTAGCACTACTCTGATTGGTGCACCGATGCGGGAATCTTCTGTAGAAGAACATGGTGAGAGCAAGCAGATGGGGATGATTTCTCAGCTTCCTAATGATGCTCAAGATATGTCCAAGACCCAACAAGGGAAAAGGAAGAAAAAGGTTGTTAAAAGATGGAGAGAAGAATGGGCAGACACCTATAAGTGGGCTTATGTTGATGTGAAGGATGGTACACCGAGGATTTTCTGCTCTGTCTGCAGGGAGTACGGTCGGAAGCATAGAAGAAATCCTTATGGGAATGAGGGCAGTCGTAATATGCAGATGAGTGCCCTGGAAGAACACAACAACAGTTTGCTTCACAAAGAGGCTCTTCGTCTTCAAATGGCCTCCAAAGATAAAATTGTGGTCGACAAGCCTGTTTATGTAAAAGCAGGATCAATTCTTGAAGCTACACTAAAAAGGGATCCTCATGAGGTTGAATTCATTCAGGCAGTCCAAGAAGCAGTTCAAGCCCTTGAAAGAGTCATAGCAAAAAATTCTCGTTATATTAACATCATGGAGCGCTTATTGGAACCTGAACGAATGATTGTTTTTCGAGTTTCATGGGTGGATGATAGGGGTGGGACATGTGTGAATCGGGGCTTTAGGGTACAGTTTAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCATCCATCAATGAATTTAAGTGTTGCCAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCACCATACAAATTAGGAGGAGCAGCTGGTGGAAGTGATTTCGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTCTGCCAAAGTTTCATGAGCGAAATGTATCGCTACCTGGGGCCTGACAAGGACCTTCCGTCTGAGGAAATGGGTGTTGGTACTCGAGAAATGGGGTATCTTTTTGGACAGTATAGGCGTCTAGCAGGTCATTTTCAGGGAAGCTTTACAGGGCCAAGGATATTTTGGTCTGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGGCTGGTTTTCTTTGCCCAGCTCATGCTTGCTGACATGAATAAAGAACTTAAAGGATTAAGATGTGCTGTGAGTGGTTCTGGAAAGATTGCAATGCATGTCTTAGAGAAGCTAATTGCTTATGGTGCTCTTCCCATTTCAGTATCAGATTCTAGAGGATATTTGGTTGATGAGGATGGATTTGACTACATGAAAATATCATTTTTGAGAGACATCAAAGCTCAACAAAGAAGTTTACGAGACTATTCAAAGACCTATGCTCGGTCCAAATATTATGATGAAGCAAAACCATGGAGTGAAAGGTGTGATGTTGCATTTGCTTGTACTTCACAGAATGAAATTGATCAATCTGATGCCATTAATTTGGTTAATTCAGGTTGTCGTATACTAGTAGAAGGTAGTTCAAACATGCCTTGTACCCCTGAGGCAGTTCAGATTCTTAGGAAAGCTAGTGTTCTCATTGCTCCTGCAATGGCTGCCGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTCACCGGAGGACTTTGAATCTAAATTGCAGGAAGCTATGAAGCAGACTTATCAGAGGGCTATGAAAGCTGCAACTGACTTTGGTTATCAAAAAGAAAGTCCTGAGGCTTTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGCCATGACTGATCAAGGCTCTATATAG 1899 0.4292 MLFPTSGVRMNSAMDDMNLIQQTQRHHLVVREIGEEIDLEIGAGEDDPSFGSTTLIGAPMRESSVEEHGESKQMGMISQLPNDAQDMSKTQQGKRKKKVVKRWREEWADTYKWAYVDVKDGTPRIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPVYVKAGSILEATLKRDPHEVEFIQAVQEAVQALERVIAKNSRYINIMERLLEPERMIVFRVSWVDDRGGTCVNRGFRVQFNQSMGPCRGGIRFHPSMNLSVAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCAVSGSGKIAMHVLEKLIAYGALPISVSDSRGYLVDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWSERCDVAFACTSQNEIDQSDAINLVNSGCRILVEGSSNMPCTPEAVQILRKASVLIAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAMKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGSI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00117 632 SMART ELFV_dehydrog_3 383 630 IPR006096 GO:0006520|GO:0016491
Gma07g00117 632 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 394 IPR006095 GO:0006520|GO:0016491
Gma07g00117 632 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 293 307 IPR006095 GO:0006520|GO:0016491
Gma07g00117 632 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 414 434 IPR006095 GO:0006520|GO:0016491
Gma07g00117 632 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 552 563 IPR006095 GO:0006520|GO:0016491
Gma07g00117 632 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 382 630 IPR036291 -
Gma07g00117 632 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 236 363 IPR006097 GO:0006520|GO:0016491
Gma07g00117 632 Gene3D Glutamate Dehydrogenase, chain A, domain 3 190 233 - -
Gma07g00117 632 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 190 375 IPR046346 -
Gma07g00117 632 Gene3D Leucine Dehydrogenase, chain A, domain 1 234 369 - -
Gma07g00117 632 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 6 631 - -
Gma07g00117 632 PANTHER BNAA06G02140D PROTEIN 6 631 - -
Gma07g00117 632 Gene3D Glutamate Dehydrogenase, chain A, domain 3 561 632 - -
Gma07g00117 632 Gene3D - 388 554 - -
Gma07g00117 632 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 382 630 IPR006096 GO:0006520|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00117 Gma-Chr7 999623 1008637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00117 211 509 EF-hand Containing Proteins AT5G07440 29.373 1.86e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00117 K00262 - gmx:100809032 1228.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00117 07 999623 1008637 Gma07g00117 07 999623 1008637 ECH
Gma07g00117 07 999623 1008637 Gma08g01811 08 16145060 16153816 GST