Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00090 ATGACTGATAGGGTTCACCCTTCGGCCAAAACCACCGCCAACGCCGGCCCCAAGCCGACATTCCCCGCTACGAAATCCCAGCTTTCCGGCGCCAACCGCCCCACCTACCGCCCCCAACCGCAGCACCACCGCCGCCGCCGTAGTCGCGGATGTGCCTCCACCCTCTGCTGCTGGCTCCTCCTGATCCTCCTCTTCCTCCTCCTCCTCGTCGGTGCCGCCGGCACCGTCCTCTACTTTCTCTACCGTCCCCAACGACCCACATTCTCCGTCACCTCCCTAAAACTCTCTTCCTTCAACCTCACCACTCCCTCCACCATCAACGCCAAGTTTGACCTCACTCTCTCAACAACTAACCCTAACGACAAAATCATCTTCTCCTACGACCCTACCTCCGTATCCCTTCTCTACGGCGACACCGCCGTCGCCAGCACCACCATCCCCTCCTTCCTCCACCGCCAAAGGAACACCACCGTGCTCCAGGCTTATGTTACTAGCACTGAGGAAGTGGTGGATAGTGACGCCGCGATGGAGCTGAAGAGGAGCATGAAGAGGAAGAGTCAGCTGGTGGCGCTGAAGGTGGAGCTGGAGACCAAGGTGGAGGCCCAGATGGGCGTGTTCCAGACGCCTCGAGTCGGGATCAAGGTTCTGTGCGACGGCGTCGCCGTATCTCTCCCCGACGATGAGAAACCGGCGACGGCGTCGGCTGAGAATACGGCGTGCCAGGTGGATGTGAGGTTTAAGGTCTGGAAATGGACCGTTGGATGA 765 0.6013 MTDRVHPSAKTTANAGPKPTFPATKSQLSGANRPTYRPQPQHHRRRRSRGCASTLCCWLLLILLFLLLLVGAAGTVLYFLYRPQRPTFSVTSLKLSSFNLTTPSTINAKFDLTLSTTNPNDKIIFSYDPTSVSLLYGDTAVASTTIPSFLHRQRNTTVLQAYVTSTEEVVDSDAAMELKRSMKRKSQLVALKVELETKVEAQMGVFQTPRVGIKVLCDGVAVSLPDDEKPATASAENTACQVDVRFKVWKWTVG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00090 254 SUPERFAMILY LEA14-like 65 160 - -
Gma07g00090 254 MobiDBLite consensus disorder prediction 1 36 - -
Gma07g00090 254 Gene3D - 75 215 - -
Gma07g00090 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 252 - -
Gma07g00090 254 Pfam Late embryogenesis abundant protein 113 215 IPR004864 -
Gma07g00090 254 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 1 252 - -
Gma07g00090 254 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00090 Gma-Chr7 740574 741630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00090 44 241 EF-hand Containing Proteins AT5G21130 22.613 2.58e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00090 - - gmx:102669753 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00090 07 740574 741630 Gma07g00090 07 740574 741630 ECH
Gma13g03137 13 45518509 45519898 Gma07g00090 07 740574 741630 PCT
Gma15g00229 15 2014758 2015728 Gma07g00090 07 740574 741630 PCT
Gma07g00090 07 740574 741630 Gma13g03137 13 45518509 45519898 PCT
Gma07g00090 07 740574 741630 Gma15g00229 15 2014758 2015728 PCT