Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00046 ATGGAAGCGAAGGAAGGAACGCCAAAATTCCCAGGGTTTCCTTTCGAACCCTATTCGATTCAGATTGATTTCATGAACAGCTTGTATGAGTCTCTCAATCAAGGTGGCGTGTCTATGTTAGAAAGCCCAACTGCAGGGACTGGGAAGACCATGAGTGTGATTTGCAGTGCCTTGCAATGGGTGCTTGATCGGAGGCTACAACAGGACGAAGCAGCGTGTGGTGAGGATAGAGGGAATGGCGGTGACGGTGGGGTAGGTTCGGATGATGAACCTGATTGGATGAGGGACTTCGTCATCGACAAAGAGGAGAAGAAGAAGGAAGAGAAATGTGGGTCTGTGTGGGGAAAGCCTCATAGTAAGAAGAAGAGCAAGGAAATTCCTAAGGATTTTAGGGTTATGGGCGTTGGAGAGGAAAAGGGTCGTGAGAGTTTGCAAAAGAAAATTGATGCAGTGGAAATTGGTGATAAGGAGTTTTTGCTAGAGGAATATGAGAGTGAAGATGAGAAAGGCTTAGGGAGTGTGGTGTCCAAGAGGAAGGCTGTTAAAACTTCTTTTAGTTCCTCTAGCGAAGATGAGTCTGGTGAGGAAGAAGAGGAAGAGGAGAAGAAGTTGAAGGTGTATTTTTGTAGTAGAACTCATTCACAGCTTTCACAGTTCATAAAAGAATTGCGGAGGACAGTTTTTGCCAACGAGATGAATGTTGTGAGTTTAGGTTCGAGGAAAAATCTTTGCATTAATGAAGAAGTAGTTGCACTTGGAAACTCCACGCGCATAAATGAGCGATGCTTGGAACTCCAGAAGAAAAAGAAAAATGAAGCTACAAAAGTTAAGAACTTGAAAGTAGGTGCAGGGGTATGCAGAACAAAGGCCTCCTCTGGCTGCCCAATGCTTAGAAAACATAGAGTTCAACAAGAATTTAGGAATGAGGTATCTCAACAAGGGCCATTGGATATTGAAGATCTTGCTAATCTTGGAAGAACTATGGGAGCATGCCCATACTATGGTTCTAGAAGCTTGGTTCAGGGAGCTGATCTTGTGGTCCTACCATATCAATCTCTTCTGTCTAAATCATCTCGTGAAACACTTGGTCTGAATTTGAAATCCAATATTATTATAATAGATGAGGCTCATAATTTAGCTGATTCACTCATCAACATGTATGACTCCAAGATTACTTCATCACAGTTGGAGATTGTGCACAGACATGTGGAACGGTACTTTGAGAGATTCCGGAATCTTTTGGGACCTGCTAATCGGAGATATATTCAAACTCTGATGGTCCTCATGCGAGCTTTTCTCCGAGCACTACTTGATGATAAAGATGGAAATCTTAAAGATTCTTGCCGTGATACAGCTCAAGCTTCTGAAGAAAGTGGAGCCTGTGATTTTACTATGGCCATCAATGATTTTTTATTTGAACTAAATATAGACAATATCAACTTGGTCAAACTGTTAAAGTATATAAAGGAAAGTAATATCATGCACAAGGTTAACGGTTATGGAGAAAAGGTGGCTACCTTGGCGAAAATACCTGCAATCCATATAATTGGGGAACAAGCAGAGGAGGGAAGCTGCATATCTGCTTTCCAAGCCTTAGCTGACATATTGCTATCACTGACAAACAATGATGGTGATGGAAGGATAATAATTTCTAGGTCTAGGTCAACAAGCTTCAAGAAGCAAGGAGGACATATTAAGTATGTTATGCTCAGTGGAGAGAAGATTTTTTCAGAGATTGTAGACGAAGCACATGCTGTTGTATTAGTAGGGGGAACACTTCAACCTATAGAAGAGACAAGGGAGCGACTCTTTCCGTGGTTACCACCAAATCAGTTGCATTTCTTTTCATGTGGTCATATTGTCCCTCCTGATAGCATTATGCCAATTGCAGTTACACGTGGTCCTACTGGACGCTCCTTTGATTTTAGCTTCAGCTCCAGGAGCTCACCAGACATGATGCGAGAACTTGGTCTTTTGCTATGTAATTTGGTGACTGTGGTTCATGAAGGAATTGTGGTTTTCTTCCCTTCTTTTGATTATGAAAATAGAGTCTATGAACATTGGAAATCATCTGGCATCCTTGAAAGGATTATTAAGAGGAAGCGTGTATTTAGGGAGCCTAGAAATAACATGGATGTTGAATCTGTTCTCAAGGAATATAAAGACACCATTGATACAATATCAGTTATGAATTCAGAAGTAAACCAAGCATCTCATAATGGTGCAATACTCCTTGCTGTTGTTGGTGCGAAGTTATCTGAAGGGATCAACTTAAGTGATGGGATGGGCCGATGTATAGTCATGGTTGGACTGCCATATCCTAGCCCATCTGACATTGAGTTGTTGGAGAGGATAAAACACATTGAAGGTTTTCGAAATTTAAAGCTTCCTGAGAATCCTAGTGTTTCTTCCAGTTATGATCTATACAGTGGAGATGTACAAGGTGGTTTTGACATTTTAAGAAGTTGCAGTCACAGAGGAAAAGAGTACTACGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATCCGTCACATTAATGACTATGCTGCAATTTTGTTGGTTGACACAAGGTATGCATCTGATTCTTCAAAACGAAGCTTTTCCCACCCAGTAACTAAGCTCCCCCAGTGGATAAAAGATCGTTTTGTTTCTTCTACCATTAACTACGGAGAGGTACATAGGTTGTTGCATCAGTTTTTCAAACTCAAGAAAACATGCTGCCATTAG 2742 0.411 MEAKEGTPKFPGFPFEPYSIQIDFMNSLYESLNQGGVSMLESPTAGTGKTMSVICSALQWVLDRRLQQDEAACGEDRGNGGDGGVGSDDEPDWMRDFVIDKEEKKKEEKCGSVWGKPHSKKKSKEIPKDFRVMGVGEEKGRESLQKKIDAVEIGDKEFLLEEYESEDEKGLGSVVSKRKAVKTSFSSSSEDESGEEEEEEEKKLKVYFCSRTHSQLSQFIKELRRTVFANEMNVVSLGSRKNLCINEEVVALGNSTRINERCLELQKKKKNEATKVKNLKVGAGVCRTKASSGCPMLRKHRVQQEFRNEVSQQGPLDIEDLANLGRTMGACPYYGSRSLVQGADLVVLPYQSLLSKSSRETLGLNLKSNIIIIDEAHNLADSLINMYDSKITSSQLEIVHRHVERYFERFRNLLGPANRRYIQTLMVLMRAFLRALLDDKDGNLKDSCRDTAQASEESGACDFTMAINDFLFELNIDNINLVKLLKYIKESNIMHKVNGYGEKVATLAKIPAIHIIGEQAEEGSCISAFQALADILLSLTNNDGDGRIIISRSRSTSFKKQGGHIKYVMLSGEKIFSEIVDEAHAVVLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIVPPDSIMPIAVTRGPTGRSFDFSFSSRSSPDMMRELGLLLCNLVTVVHEGIVVFFPSFDYENRVYEHWKSSGILERIIKRKRVFREPRNNMDVESVLKEYKDTIDTISVMNSEVNQASHNGAILLAVVGAKLSEGINLSDGMGRCIVMVGLPYPSPSDIELLERIKHIEGFRNLKLPENPSVSSSYDLYSGDVQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPVTKLPQWIKDRFVSSTINYGEVHRLLHQFFKLKKTCCH 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00046 913 Gene3D - 638 879 IPR027417 -
Gma07g00046 913 SMART Cxpdneu3 678 865 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Gma07g00046 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 392 IPR027417 -
Gma07g00046 913 Pfam Helicase C-terminal domain 660 875 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Gma07g00046 913 Gene3D - 14 69 IPR027417 -
Gma07g00046 913 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 7 425 IPR014013 GO:0005524
Gma07g00046 913 Gene3D - 177 431 IPR027417 -
Gma07g00046 913 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 9 890 IPR045028 -
Gma07g00046 913 PANTHER ATP-DEPENDENT DNA HELICASE DDX11-RELATED 9 890 IPR028331 -
Gma07g00046 913 SMART deadxpd 9 419 IPR006554 GO:0003678|GO:0016818
Gma07g00046 913 Pfam DEAD_2 208 396 IPR010614 GO:0003677|GO:0003678|GO:0005524
Gma07g00046 913 TIGRFAM rad3: DNA repair helicase (rad3) 152 894 IPR013020 GO:0003678
Gma07g00046 913 MobiDBLite consensus disorder prediction 72 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00046 Gma-Chr7 390037 395149 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00046 K11273 - gmx:106794132 1704.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00046 07 390037 395149 Gma07g00046 07 390037 395149 ECH