Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00031 ATGGCTGGCACCGGCATCCACCCATACCACCAGCAATGGGCTCCGGCGGCTGCCGCTCCTCCTCCTCCTCCGGCAGCCGCGGGCGGTCCTCCTCCTCACCCTGGGGAGGAGGTTCGAACGATATTCATAACTGGTCTTCCGGAAGACGTGAAAGAGAGAGAGCTGCAGAATCTGCTGAGATGGCTGCCCGGTTTCGAAGCATCTCAACTGAATTTCAAAGCTGAGAAGCCAATGGGTTTTGCTCTCTTCTCCGCACCACACCAAGCACTCGCCGCCAAAGACATTCTTCAGGACATGCTCTTCGATCCAGACACCAAGTCCGTCCTCCACACTGAGATGGCAAAGAAAAATCTATTCGTCAAAAGAGGAATCGGAGCTGCTGATGCGGGCGGTGCTTTTGATCAAAGTAAGCGCTTAAGGACAGCCGGAGATTATACACACAGTGGCTATACAAGTCCATCTCCTTTTCATCCTCCCCCGCCTCCCGTGTGGGGACCACATGGATACATGGCTCCGCCTCCTCCTCCTCCTCCATATGATCCATATGCTGGCTATCCCGTTGCGCCTGTACCAATGCCCACTCCTGCTCCCATACCAGCACCTAGCACTTATGTTCCTGTTCAGAACACAAAAGATAACCCTCCTTGCAACACCCTGTTTATTGGGAACTTGGGAGAGAACATAAACGAGGAAGAAGTCAGGGGCCTTTTCAGTGTACAACCTGGTTTTAAGCAAATGAAGATTTTAAGACAGGAGAGGCATACAGTTTGCTTCATCGAGTTTGAAGATGTGAATAGTGCTACGAATGTGCACCATAATCTGCAGGGTGCTGTTATCCCAAGTTCTGGATGCATCTTGCAGCTGTCACATGCATCCATTGATCATCAAGTCATCGCCATTAGCATCCTTGCTCATGTGAATGAATGCAGTGGCATCATCATATACATACATTTGGCTATGTTAATACTAATCGGACATGCATATCTTGGCAACATGCGTTGGTTCCTGGATTACTTTCGATTTCAAAACATGACAAAGCTTCCTTTCATAATGGGAGATCCATTACTGCTGCTGCCATATCATTGCAGCTAG 1092 0.4945 MAGTGIHPYHQQWAPAAAAPPPPPAAAGGPPPHPGEEVRTIFITGLPEDVKERELQNLLRWLPGFEASQLNFKAEKPMGFALFSAPHQALAAKDILQDMLFDPDTKSVLHTEMAKKNLFVKRGIGAADAGGAFDQSKRLRTAGDYTHSGYTSPSPFHPPPPPVWGPHGYMAPPPPPPPYDPYAGYPVAPVPMPTPAPIPAPSTYVPVQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGCILQLSHASIDHQVIAISILAHVNECSGIIIYIHLAMLILIGHAYLGNMRWFLDYFRFQNMTKLPFIMGDPLLLLPYHCS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00031 363 PANTHER CELL WALL INTEGRITY PROTEIN SCW1 1 296 - -
Gma07g00031 363 CDD RRM_RBPMS_like 39 112 - -
Gma07g00031 363 MobiDBLite consensus disorder prediction 14 36 - -
Gma07g00031 363 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 219 280 IPR000504 GO:0003723
Gma07g00031 363 SUPERFAMILY RNA-binding domain, RBD 37 280 IPR035979 GO:0003676
Gma07g00031 363 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 217 293 IPR000504 GO:0003723
Gma07g00031 363 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 1 296 - -
Gma07g00031 363 CDD RRM_scw1_like 215 284 - -
Gma07g00031 363 SMART rrm1_1 40 110 IPR000504 GO:0003723
Gma07g00031 363 SMART rrm1_1 218 289 IPR000504 GO:0003723
Gma07g00031 363 MobiDBLite consensus disorder prediction 15 31 - -
Gma07g00031 363 Gene3D - 204 291 IPR012677 -
Gma07g00031 363 Gene3D - 35 120 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00031 Gma-Chr7 271454 274180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00031 - - gmx:100797865 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00031 07 271454 274180 Gma07g00031 07 271454 274180 ECH
Gma07g00031 07 271454 274180 Gma08g01975 08 17744540 17746234 GST