Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00016 ATGTCGTCTTCCAACTCCAAAACCCAAACCCAAACCCCTTCTTCACTCTCACTCTGCACCTCTAAGCCTCAGGCATGTAACATGGCATTGGAATCCCAACCGCAGAAGAACAAGTATGGACACGGGGTGTTTGGAGACGTCTCCAGCATCATCAAAGAGATGGAGATTGATCATCCCAACTCTACCTTTGATTTTCAATTTCAATTTCCCCCAATTGCTAATTTTCTGGGCTCTAGAGAGGTTCGCGAGTTTATTAGCGGGGCCCTTGCAGGGGCGATGGCAAAGGCTATACTTGCTCCTCTTGAGACCATCAGGACAAGAATGGTAGTTGGTGTTGGGTCAAAAAATATTGCTGGTAGTTTCATAGACGTTATAGAGCAGCAGGGATGGCAAGGACTGTGGGCTGGAAACATGATCAATATGCTTCGTATAGTTCCAACACAGGCCATTGAGCTAGGCACATTTGAGTGTGTCAAACGGGCTATGACATCCCTGCATGAGAAATGGGAACACAATGAATACCCCAAGTTGCAGATAGGTTCCATCAATTTCAACTTATCTTTATCTTGGATTTCACCAGTTGCCATTGCCGGTGCGGCTGCAGGAATTGCTAGCACAGTTGTATGCCATCCCCTCGAAGTTTTGAAGGACCGGTTAACTGTAAGTCCTGAAACTTACCCTAATTTAGGTATTGCGATTAGAAATATTTATAAAGATGGTGGTGTTGGCGCTTTTTATGCTGGTATCTCACCAACTCTGGTTGGCATGCTTCCATACAGTACGTGTTTTTATTTCATGTATGATACGATAAAGGAATCTTACTGCCGCACCAGAAATAAGAAATCTCTAAGCCGTCCAGAGATGATTTTGATCGGAGCTTTTGCAGGTTTCACTGCCAGTACAATTAGCTTCCCCTTGGAGGTAGCAAGGAAGCGCCTGATGGTGGGTGCTTTGCAAGGTAAGTGCCCGCCAAACATGGCGGCAGCACTTTCAGAAGTTATTAGAGAAGAAGGTCTGAAGGGTCTCTACAGAGGATGGGGTGCAAGCTGTTTGAAGGTCATGCCATCCTCTGGTATCACCAGGATGTTTTATGAAGCTTGGAAAGATATATTGCTTGTCCAGAATGGTAATCCCCTTTAG 1140 0.4535 MSSSNSKTQTQTPSSLSLCTSKPQACNMALESQPQKNKYGHGVFGDVSSIIKEMEIDHPNSTFDFQFQFPPIANFLGSREVREFISGALAGAMAKAILAPLETIRTRMVVGVGSKNIAGSFIDVIEQQGWQGLWAGNMINMLRIVPTQAIELGTFECVKRAMTSLHEKWEHNEYPKLQIGSINFNLSLSWISPVAIAGAAAGIASTVVCHPLEVLKDRLTVSPETYPNLGIAIRNIYKDGGVGAFYAGISPTLVGMLPYSTCFYFMYDTIKESYCRTRNKKSLSRPEMILIGAFAGFTASTISFPLEVARKRLMVGALQGKCPPNMAAALSEVIREEGLKGLYRGWGASCLKVMPSSGITRMFYEAWKDILLVQNGNPL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00016 379 PANTHER MITOCHONDRIAL ADENINE NUCLEOTIDE TRANSPORTER BTL1-RELATED 41 375 - -
Gma07g00016 379 PANTHER SOLUTE CARRIER FAMILY 25 41 375 - -
Gma07g00016 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 273 IPR018108 -
Gma07g00016 379 Gene3D Mitochondrial carrier domain 77 375 IPR023395 -
Gma07g00016 379 PRINTS Mitochondrial carrier protein signature 246 264 IPR002067 GO:0055085
Gma07g00016 379 PRINTS Mitochondrial carrier protein signature 96 110 IPR002067 GO:0055085
Gma07g00016 379 PRINTS Mitochondrial carrier protein signature 292 314 IPR002067 GO:0055085
Gma07g00016 379 PRINTS Mitochondrial carrier protein signature 83 96 IPR002067 GO:0055085
Gma07g00016 379 PRINTS Mitochondrial carrier protein signature 136 156 IPR002067 GO:0055085
Gma07g00016 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 287 370 IPR018108 -
Gma07g00016 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 78 161 IPR018108 -
Gma07g00016 379 SUPERFAMILY Mitochondrial carrier 81 365 IPR023395 -
Gma07g00016 379 Pfam Mitochondrial carrier protein 195 274 IPR018108 -
Gma07g00016 379 Pfam Mitochondrial carrier protein 81 163 IPR018108 -
Gma07g00016 379 Pfam Mitochondrial carrier protein 287 372 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00016 Gma-Chr7 177226 179186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00016 65 379 Organic Solute Cotransporters AT3G20240 71.160 1.15e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00016 - - gmx:100795558 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00016 07 177226 179186 Gma07g00016 07 177226 179186 ECH
Gma07g00016 07 177226 179186 Gma08g02069 08 18554719 18556965 GST