Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00014 ATGAGTATGTCTATTATGCATGCAATGTCAATCAGAAGCAGCGCTTTCTTTTGCTTTCAAATAAATTGCTCCGATTCAAAGCAAGGCCGTGGTTTTGGAGAAAACACTAACAGTAACAGGATTAAGACCAACAAATCTGACAAGGGATTGGTGTCTCAGCAAAGCAAGGGATCAGCAAATAAACAGTCTCGCCCTCTATCTTCTCAGGCACCCCGTTTAAGTTCACAACTTGACGGCAAATCTAGGAACGATTTTTTGGATGTTGACTTTGAGGAACGGCTAAAAGCAGTTAGAAGGTCAGCACTTGAGCAGAAGAAGGCAGAGGAGGAAAAAGAATTTGGAGCAATTGACTATGATGCACCAATTCCTTCCGACAATACGACAATTGGCGTTGGTACTAAGATTGGAGTTGGGGTAGCTGTTGCAGTCTTTGGTCTGGTTTTTGCTTTTGGAGATTTTCTTCCATCAGGAAGTGTTAGTCCCACTGAAGACAGTGCTGTGGTCAATAGTAAGTTGTCTGAGGAGGATAAAGCTACTCTTCAGAGTAGGCTCAAGGAATTTGAAGCAACATTAAGTAATTCCTCAAGAGATCCAACTGCTCTTGAAGGAGCTGCAATAACTTTGGCTGAACTAGGGGAATATGCAAGAGCTGCTTCTCTACTTGATGATTTGACAAAGGAAAAACCAAATGATGCTGATGTTTTTCGTTTGCTTGGAGAAGTTAAGTATGAACTCAAAGATTATGAAGGGAGTGTTGCTGCATATAAAAGCTCAGCAAGGGTGTCCAAAGATATCCAATTTGAAGTTCTGCGTGGCCTTTCCAATTCATTACTTGCTGCCAAAAAGCCAGAGGAGGCTGTTCAATTACTTTTGGCCTATCGTGAGCATCTGagttctgatagcaacccaacagactcacagaagttggatccagttcaaGTTGAATTACTTCTAGGGAAAGCCTACTCAGATTGGGGCCATGTCAGGGATGCTGTAGCTGTTTATGATCAGCTCATATCTACTCACCCTAATGATTTTCGTGGATACTTAGCTAAGGGAATCATCCTAAAAGAAAACAAAAATATTGGTGATGCAGAAAGGATGTTCATACAAGCTAGGTTCTTTGCACCAGATAAAGCCAAAGCCCTTGTGGACCGTTATTCAAGATGA 1170 0.4 MSMSIMHAMSIRSSAFFCFQINCSDSKQGRGFGENTNSNRIKTNKSDKGLVSQQSKGSANKQSRPLSSQAPRLSSQLDGKSRNDFLDVDFEERLKAVRRSALEQKKAEEEKEFGAIDYDAPIPSDNTTIGVGTKIGVGVAVAVFGLVFAFGDFLPSGSVSPTEDSAVVNSKLSEEDKATLQSRLKEFEATLSNSSRDPTALEGAAITLAELGEYARAASLLDDLTKEKPNDADVFRLLGEVKYELKDYEGSVAAYKSSARVSKDIQFEVLRGLSNSLLAAKKPEEAVQLLLAYREHLSSDSNPTDSQKLDPVQVELLLGKAYSDWGHVRDAVAVYDQLISTHPNDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00014 389 Pfam Tetratricopeptide repeat 204 259 - -
Gma07g00014 389 Coils Coil 91 111 - -
Gma07g00014 389 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 11 389 - -
Gma07g00014 389 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 11 389 - -
Gma07g00014 389 MobiDBLite consensus disorder prediction 29 80 - -
Gma07g00014 389 Gene3D Tetratricopeptide repeat domain 164 387 IPR011990 GO:0005515
Gma07g00014 389 SMART tpr_5 198 231 IPR019734 GO:0005515
Gma07g00014 389 SMART tpr_5 312 345 IPR019734 GO:0005515
Gma07g00014 389 SMART tpr_5 346 379 IPR019734 GO:0005515
Gma07g00014 389 SMART tpr_5 232 265 IPR019734 GO:0005515
Gma07g00014 389 ProSiteProfiles TPR repeat profile. 312 345 IPR019734 GO:0005515
Gma07g00014 389 SUPERFAMILY TPR-like 184 382 IPR011990 GO:0005515
Gma07g00014 389 Coils Coil 177 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00014 Gma-Chr7 158651 164198 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00014 - - gmx:100790462 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00014 07 158651 164198 Gma07g00014 07 158651 164198 ECH