Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02884 ATGGTGATGGAAAAGAAGATGAAGGTCCGTTCGGAAAGGGAAAAGACGAAAGTTGTGATTAGGCATTTGCCCCCTTCTCTCTCTCAATCCGATCTCTCCCAACACATCGATTCTCACTTCGCTTCTCGCTACAATTGGTTCTCTTTCCGTCCCGGCAACAACAGTCACACTCGTCAGAGGCATTCCCGTGCCTATATAGACTTCAAGTGTCCCGATGACGTTTTCGAGTTCGCCGAGTTCTTTGATGGACACGTTTTTGTTAACGAGCGAGGTGCCCAGCATAAAGTTATAGTTGAGTACGCTCCTTCTCAGCGTGTTCCAAAGCCTAGTGCCAAAAAGGATGGACGTGAAGGGACTATATACAAAGATCCAGACTATCTTGAGTTCCTCAAACTAATTGCAAAGCCTCAAGAGCATCTTCCTAGTGCAGAGGTACAATTGGAAAGAAAAGAAGCTGAGCAAGCTGGGGCTAACAAGGAAACACGAATTGTCACACCCCTGATGGAATTTGTTCGTCAGAGACGTGCTGTTGACAGTGGTATGCAGgcttcatcagcggtggcaaaagttagcagaagatccagagctgctttgcctggcaagcctggctcaggcaatactaaacgaggatctgaaaagaaaaagTATGTTCAGAAGGACAATGCCAAGGGTGTTGCTCGCAAAGAGTCAAAAGACAAGTCAGCCTTTGTTGTGGTCCCCCGGCGAGACAATCAATCAGCTGAATCAATGCATGGTATTGAAGGTCCCTTTTCTGGAATTTCACTGACTTCTGACTCAGGAAAGAAAAAAATCCTTCTTCTTAAAGGGAAACAGCGGGAAATTCCCAGTGCTATTGAGGGCACAGTAAAACAGCAAAACATACAATCTGGAAATTCTCCTATTTCTGCTCCTGCAAAACAGAACCAGAGACGTGAAGCTAGTGGAAGATTGATTAGGAGCATACTTCTAAATAATGAATCTCGTCAGAGTCTGTCTACAACTGGTGCCCAACATAAAATTCAAATTTTAAGTTCTGAAAATGGGAAGCGACCCCCTCGTACTTTTGGCTCAAGGTCTGGGTTAAATGATCAAGTCTCGAATAATGATGCTGCACAAGTTAATTCTGAAGGGGATTCCAAAATGGCATTGGACAAAAAGTTCGTAAAAAGGGATCTGCATGGTTTGGGTAGCGGTGAGAAAACAGAAAAACGTACTAGAAACAAGGATAGACCTGATCGTGGTGTTTGGACACCCCTTCGCCGTTCTGATGTTTCAAATGCTGGTAATGACCATTCATCATCCTCATTGGCACAGCCTACTCAGTCAAATCCTGAATCTGCTGAAGGAGAAGTAAAAGAAAATGTTCCTTCTGGAAACAGGGGAGGCGAATTCTCTGCTTCTGCAGGTGGACGTGGGAATCCTTCCATTGAGAATGATTCTCAGAGAAATTTTACTCGCCGTGGCGCTTCCTATATAGTGAAGGATGATGGTGCAGTCAGTATAAGTGAAGGGAAACCTTCCAAGAAAAGTGTTGGGCATAGCGCTCACGAGAAGCAAGTCTGGGTTCAGAAATCTTCTTCAGGGTCATAA 1590 0.4176 MVMEKKMKVRSEREKTKVVIRHLPPSLSQSDLSQHIDSHFASRYNWFSFRPGNNSHTRQRHSRAYIDFKCPDDVFEFAEFFDGHVFVNERGAQHKVIVEYAPSQRVPKPSAKKDGREGTIYKDPDYLEFLKLIAKPQEHLPSAEVQLERKEAEQAGANKETRIVTPLMEFVRQRRAVDSGMQASSAVAKVSRRSRAALPGKPGSGNTKRGSEKKKYVQKDNAKGVARKESKDKSAFVVVPRRDNQSAESMHGIEGPFSGISLTSDSGKKKILLLKGKQREIPSAIEGTVKQQNIQSGNSPISAPAKQNQRREASGRLIRSILLNNESRQSLSTTGAQHKIQILSSENGKRPPRTFGSRSGLNDQVSNNDAAQVNSEGDSKMALDKKFVKRDLHGLGSGEKTEKRTRNKDRPDRGVWTPLRRSDVSNAGNDHSSSSLAQPTQSNPESAEGEVKENVPSGNRGGEFSASAGGRGNPSIENDSQRNFTRRGASYIVKDDGAVSISEGKPSKKSVGHSAHEKQVWVQKSSSGS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02884 529 MobiDBLite consensus disorder prediction 288 313 - -
Gma06g02884 529 MobiDBLite consensus disorder prediction 181 234 - -
Gma06g02884 529 MobiDBLite consensus disorder prediction 422 448 - -
Gma06g02884 529 MobiDBLite consensus disorder prediction 207 234 - -
Gma06g02884 529 PANTHER REGULATOR OF NONSENSE TRANSCRIPTS UPF3 7 528 - -
Gma06g02884 529 CDD RRM_like_Smg4_UPF3 17 102 - -
Gma06g02884 529 MobiDBLite consensus disorder prediction 329 529 - -
Gma06g02884 529 Pfam Smg-4/UPF3 family 14 175 IPR005120 -
Gma06g02884 529 PANTHER UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN 7 528 IPR039722 GO:0000184
Gma06g02884 529 Coils Coil 140 160 - -
Gma06g02884 529 Gene3D - 7 105 IPR012677 -
Gma06g02884 529 MobiDBLite consensus disorder prediction 329 375 - -
Gma06g02884 529 SUPERFAMILY RNA-binding domain, RBD 16 105 IPR035979 GO:0003676
Gma06g02884 529 MobiDBLite consensus disorder prediction 379 417 - -
Gma06g02884 529 MobiDBLite consensus disorder prediction 288 309 - -
Gma06g02884 529 MobiDBLite consensus disorder prediction 471 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02884 Gma-Chr6 52630335 52639860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02884 K14328 - gmx:100795376 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02884 06 52630335 52639860 Gma06g02884 06 52630335 52639860 ECH