Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02876 ATGGCTGCTGTGAACGAATGGCTAAATGGTTATTTGGAGGCCATATTGGACGTGGGAAGCAGTGTAAAGGAGAAGAAAAATGATGGGAAGGTCAAGAATTTTGCAAAGTTTGAACAAGAGAAACATCAGAGAGAAGAAAAGTTGTTTAATCCCACCACCAAGTACTTTGTTGAAGAAGTTGTTAATAGCTTTAATGAACATGATCTTTACAGAACTTGGGTTAAGGTAACAGCTAGAAGGAATACCCGTGAACGTAGTAATAGGTTGGAGAATATGTGCTGGCGTATATGGCATCTAACTCGCAAAAAGAAACAGATTGCATGGGATGATGCTCAAAGGCTTGCAAGAAAGCGTCTTGATCGTGAACAAGGCCGTAACGATGCTGCAAATGACCTTTCTGAGCTCTCGGAAGGTGAGAAAGAAAAAGCAGATGCTAATGCTAATGCTAATGCTTTGGAACCTTTCAAGGATAATAATATTTCCAGAATCACTTCTGAAATGCAACTTTGGTCGGAGGAGGATGATAACTCTAGGAACCTTTATGTTGTCCTAATCAGTGTTCATGGTTTGGTACGAGGAGAAAATATGGAACTTGGGAGAGATTCTGATACTGGTGGTCAGGTGAAATATGTAGTGGAACTTGCTCGTGCTCTAGCCAACACAAAAGGAATTTACCGTGTTGACCTATTGACTAGACAAATAGCTTCACCAGTAGAAGTGGACTCTGGCTACGGAGAGCCTATTGAGATGTTGTCATGCCCCTCTGATGGCAGTGACTGTGGCGGAGCATACATCATTCGTCTTCCATGCGGACCTCGTGATAGGTACATACCAAAAGAATCACTTTGGCCTCACTTGCCTGAATTTGTGGATGGTGCTCTAGGTCACATTGTTAACATGGCAAGAGTTTTAGGGGAGCAAGTGAATAGTGGGAAGCCAACATGGCCTTATGTTATCCATGGTCACTATGCTGATGCTGGGGAGGTAGCAGCACACTTATCTGGGGCCTTGAATGTGCCTATGGTGCTCACAGGGCACTCGTTAGGTCGGAACAAGTTTGAGCAGTTGTTGAAGCAAGGGAGGCTCTCTAGGGAGGCCATAAATGCAACCTACAAGATCATGAGGAGGATTGAGGCTGAGGAGTTGGGTGTGGATGCTGCTGAAATGGTTGTCACTAGCACAAGGCAGGAGATTGAAGAGCAATGGGGACTGTATGATGGGTTTGATCTCAAGTTGGAGAGGAAGCTTAGGGTGAGGAGAAGACGCGGAGTGAGTTGCCTTGGAAGACGCACGCCAAGGATGGTGGTAATTCCTCCAGGCATGGACTTCAGCTATGTCACAACACAAGACTCAGTGGAAGGTGAGGGGGACCTCAACTCATTCATTGGATCTGACAGAGCTCAAAGCAAAAGGAACTTGCCTCCAATTTGGTCTGAGATAATGAGATTTTTCACAAATCCTCACAAACCAACAATACTAGCCTTGTCCCGTCCTGACCCGAAGAAAAATGTCACGACTTTGCTCAAGGCTTTTGGGGAATGCCAGGCCCTAAGAAAACTAGCTAACTTGACCCTCATACTTGGCAACAGAGATGACATTGAAGAAATGTCTAGCAGCAGCTCTACTGTTCTTACCATGGTGCTCAAACTCATTGACAAGTATGATTTGTATGGTCAAGTGGCTTATCCCAAGCATCATAAGCAATCTGAAGTTCCAGAAATATATCGTCTGGCTGCAAAGACTAAGGGAGTTTTTATCAACCCAGCCCTGGTGGAACCATTTGGTCTCACACTAATCGAGGCTGCAGCTTATGGTTTACCTGTTGTTGCAACAAAAAATGGAGGGCCAGTGGATATTCTAAAGGCACTCAACAATGGACTCTTGATTGATCCACATGACCAGAAAGCCATAGAAGATGCACTGCTAAAGCTTGTTGCAGACAAAAATCTTTGGCTAGAATGCCGCAAAAATGGCCTAAAAAACATCCATCGGTTTTCTTGGCCTGAACACTGCCGCAACTACCTCTCCCATGTTGAGTATGGCAGGAACCGCCACTCCACATCCCGCTTGGAAATTACACCAATGACTGAAGAATCAATAAGTGACTCATTGAGAGATGTAGAAGACATTTCTTTTAGATTCTCCACAGAAGGAGACTCCAAGCAGAATGGAGAGATGGACACTGCAGCAAGGCAGAAGCAAATTATTGAAGCAATCATGTGCAGGGTCTCTTCCACTGGCAAGTCTAATGCCAGTTACTTTCCTGGTAGGAGGCAAAGGCTTGTTGTGGTAGGTGCTGATTGTTATGATAGTGATGGAAATATAGCTGAGGAGGATTTTCAGGCAGTTATCATGAATGTGATGAAATCCGTGCGACCAGGCATCAGATCAGGCAAGGTTGGTGTGGTGTTGCTAACCGGTTTGAGTTTTCAGGAGACAACTGAAGCATTGAACAGCTTCCAAGTGAACATAGAAGAATTTGATGCTGTGGTTTGCAACAGTGGAAGTGAAATGTATTATCCATGGAAAGATTTAATGGCTGATGCTGATTATGAGGCCCATGTTGAGTATGCATGGCCAGGTGAGAATATTAGATCAACAATAACCAGGCTTGCTAAAGTTGATGATGGAGAGGAGAATGGCATCATAGAGTATGCTAGTGCTTGCAGTTCAAGGTGCTACTCCTATAGTGTGAAATCAGGAGCCATGatcCGGAAGATAGACGAGCTTCGCCAAAGGTTGCGAATGAGAGGCTTACGCTGTAATCTGGTCTATACACATGCAGGATTGAGATTAAATGTGATACCATTATTTGCTTCAAGAAAACAAGCACTAAGGTATCTGTCAGTCAAGTGGGGAATTGATCTATCCAAAGTGGTTGTATTTGTGGGAGAAAAAGGTGACACGGATTATGAAGAACTAGTGGCTGGCATACAGAAGACACTTGTTTTAAAGGGGGCTGTTGAATATGGCAGTGAAAGGCTTCTTCGCAGTGAAGACAGTTACAAAAGAGAAGATGTGTTCTCCCAAGATAGCCCCAACATTATTTATGCAGAGAAGAGCTATGAGGACTGTGATATTTCAGCAATTTTGGAGCATCTCAAAGTATCATGA 3114 0.4403 MAAVNEWLNGYLEAILDVGSSVKEKKNDGKVKNFAKFEQEKHQREEKLFNPTTKYFVEEVVNSFNEHDLYRTWVKVTARRNTRERSNRLENMCWRIWHLTRKKKQIAWDDAQRLARKRLDREQGRNDAANDLSELSEGEKEKADANANANALEPFKDNNISRITSEMQLWSEEDDNSRNLYVVLISVHGLVRGENMELGRDSDTGGQVKYVVELARALANTKGIYRVDLLTRQIASPVEVDSGYGEPIEMLSCPSDGSDCGGAYIIRLPCGPRDRYIPKESLWPHLPEFVDGALGHIVNMARVLGEQVNSGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLSREAINATYKIMRRIEAEELGVDAAEMVVTSTRQEIEEQWGLYDGFDLKLERKLRVRRRRGVSCLGRRTPRMVVIPPGMDFSYVTTQDSVEGEGDLNSFIGSDRAQSKRNLPPIWSEIMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQALRKLANLTLILGNRDDIEEMSSSSSTVLTMVLKLIDKYDLYGQVAYPKHHKQSEVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAYGLPVVATKNGGPVDILKALNNGLLIDPHDQKAIEDALLKLVADKNLWLECRKNGLKNIHRFSWPEHCRNYLSHVEYGRNRHSTSRLEITPMTEESISDSLRDVEDISFRFSTEGDSKQNGEMDTAARQKQIIEAIMCRVSSTGKSNASYFPGRRQRLVVVGADCYDSDGNIAEEDFQAVIMNVMKSVRPGIRSGKVGVVLLTGLSFQETTEALNSFQVNIEEFDAVVCNSGSEMYYPWKDLMADADYEAHVEYAWPGENIRSTITRLAKVDDGEENGIIEYASACSSRCYSYSVKSGAMIRKIDELRQRLRMRGLRCNLVYTHAGLRLNVIPLFASRKQALRYLSVKWGIDLSKVVVFVGEKGDTDYEELVAGIQKTLVLKGAVEYGSERLLRSEDSYKREDVFSQDSPNIIYAEKSYEDCDISAILEHLKVS 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02876 1037 Gene3D - 797 965 IPR023214 -
Gma06g02876 1037 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 4 1030 IPR044161 GO:0005986|GO:0046524
Gma06g02876 1037 Pfam Sucrose synthase 182 408 IPR000368 GO:0005985|GO:0016157
Gma06g02876 1037 CDD HAD_SPS 761 987 IPR035659 -
Gma06g02876 1037 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 196 677 - -
Gma06g02876 1037 Gene3D Glycogen Phosphorylase B; 182 681 - -
Gma06g02876 1037 Gene3D - 859 937 - -
Gma06g02876 1037 PANTHER SUCROSE-PHOSPHATE SYNTHASE 4-RELATED 4 1030 - -
Gma06g02876 1037 Pfam Glycosyl transferases group 1 486 658 IPR001296 GO:0016757
Gma06g02876 1037 Pfam Sucrose-6F-phosphate phosphohydrolase 786 970 IPR006380 -
Gma06g02876 1037 Gene3D Glycogen Phosphorylase B; 441 666 - -
Gma06g02876 1037 TIGRFAM sucrsPsyn_pln: sucrose phosphate synthase 3 1034 IPR012819 GO:0005985|GO:0046524
Gma06g02876 1037 MobiDBLite consensus disorder prediction 122 146 - -
Gma06g02876 1037 CDD GT4_sucrose_synthase 181 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02876 Gma-Chr6 52549738 52558804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02876 187 1032 Glycosyltransferase AT4G10120 73.404 0.0 1285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02876 K00696 - gmx:100786531 2025.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02876 06 52549738 52558804 Gma06g02876 06 52549738 52558804 ECH