Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02842 ATGAATCTGTACCACTCCTCCACCACCACCACCACCACCACCATCTTCACCGTCATATTCCTCCTCCTTGCAATATTATTCACTCTCACACCCCACAAGGCCAACGGTGCCACGTGTCACCCTGAGGAAGAAGCGGGCCTGTTGGGCTTCAAATCCGGTATCCGATCCGACCCGTCCGGCCTGCTCAGTAACTGGATATCGGGTACGGACTGCTGCACATGGACCGGAGTAGAATGCCACTATAACAGCACCCGGGTCCAAAGATTATTCTTAACGGGTCAAAAACCCGAAACCATCTTATCGGGTACCATCTCACCCACCCTCTCAAAACTCAAACTCCTCGATGGACTCTACCTCATAAACCTCATCAACATTTCGGGTCCCTTCCCAAATTTTCTTTTCCAACTTCCAAATCTCCAATTTATCTATCTAGAAAACAACAATCTCTCGGGTCGAATACCCGATAACATCGGTAACCTTACCCGATTAGATGTACTCAGTTTAACTGGTAACCGGTTCATCGGACCCGTACCGAGTTCAATAACCAAGTTGACTCAGCTCACTCAGCTCAAACTCGGTAACAATTTTCTCACCGGAACAGTTCCCCAAGGAATTGCCAAGCTCGTTAATTTAACCTATTTGAGTCTCGAAGGAAACCAACTTGAAGGTACCATACCGGATTTTTTCTCTTCCTTCACGGATCTTCGGATTCTTAATTTTTCTTACAACAAATTTTCCGGGAATATCCCCAACTCGATTTCTTCCCTGGCGCCGAAACTGACGTACTTGGAGCTTGGGCACAACTCACTTTCCGGGAAAATCCCTGATTTTCTGGGAAAATTCAAGGCGCTTGACACGCTTGACCTGTCATGGAACAAGTTTTCCGGAACGGTCCCTGCGAGTTTCAAGAACCTGACGAAAATCTTCAACCTGAACCTCTCCAACAACCTCCTGGTGGACCCGTTCCCCGAGATGAACGTGAAAGGGATAGAATCGTTGGACTTGTCGAACAACAGTTTTCACCTGGGGAGCATTCCCAAGTGGGTGGCTTCGTCGCCGATAATATTCTCTCTGAAGCTTGTGAATTGCGGAATAAAGATGAGGCTAGAGGATTTTAAGCCTTCGGAGACTTATTTCTATGATTTTATTGATCTTTCGGGGAATGAAATTTCAGGGAGTGCAATTGGGTTGGTGAATAGTACTGAGTATTTGGTGGGGTTTTGGGCTTCGGGGAACAAGTTGAAGTTTGATTTGGGGAAGTTAAGGTTTGGGGAGAGGTTTAAGTTTTTGGATTTGTCTCGTAATTGGGTGTTTGGGAAGGTTCCAAACAGTGTTGTTGGGCTTGAGAAGTTGAATGTTAGCTATAACCATCTTTGTGGTCAGCTTCCCAAGAATAAGTTTCCGGCAAGTGCTTTTGTTGGAAATGATTGTCTCTGTGGTTCTCCTTTGCCACCCTGCAACAAAGCATAA 1470 0.4612 MNLYHSSTTTTTTTIFTVIFLLLAILFTLTPHKANGATCHPEEEAGLLGFKSGIRSDPSGLLSNWISGTDCCTWTGVECHYNSTRVQRLFLTGQKPETILSGTISPTLSKLKLLDGLYLINLINISGPFPNFLFQLPNLQFIYLENNNLSGRIPDNIGNLTRLDVLSLTGNRFIGPVPSSITKLTQLTQLKLGNNFLTGTVPQGIAKLVNLTYLSLEGNQLEGTIPDFFSSFTDLRILNFSYNKFSGNIPNSISSLAPKLTYLELGHNSLSGKIPDFLGKFKALDTLDLSWNKFSGTVPASFKNLTKIFNLNLSNNLLVDPFPEMNVKGIESLDLSNNSFHLGSIPKWVASSPIIFSLKLVNCGIKMRLEDFKPSETYFYDFIDLSGNEISGSAIGLVNSTEYLVGFWASGNKLKFDLGKLRFGERFKFLDLSRNWVFGKVPNSVVGLEKLNVSYNHLCGQLPKNKFPASAFVGNDCLCGSPLPPCNKA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02842 489 Pfam Leucine rich repeat 258 318 IPR001611 GO:0005515
Gma06g02842 489 Pfam Leucine rich repeat 162 221 IPR001611 GO:0005515
Gma06g02842 489 SUPERFAMILY L domain-like 69 445 - -
Gma06g02842 489 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 7 488 IPR045273 -
Gma06g02842 489 SMART LRR_typ_2 208 231 IPR003591 -
Gma06g02842 489 SMART LRR_typ_2 281 304 IPR003591 -
Gma06g02842 489 SMART LRR_typ_2 184 207 IPR003591 -
Gma06g02842 489 SMART LRR_typ_2 136 160 IPR003591 -
Gma06g02842 489 SMART LRR_typ_2 445 474 IPR003591 -
Gma06g02842 489 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Gma06g02842 489 Gene3D Ribonuclease Inhibitor 260 489 IPR032675 -
Gma06g02842 489 Pfam Leucine Rich Repeat 235 256 IPR001611 GO:0005515
Gma06g02842 489 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515
Gma06g02842 489 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 488 - -
Gma06g02842 489 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Gma06g02842 489 Gene3D Ribonuclease Inhibitor 200 259 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02842 Gma-Chr6 52255564 52257174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02842 126 481 Receptor kinase-like Gene Family AT3G56370 29.630 1.08e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02842 - - gmx:100305447 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02842 06 52255564 52257174 Gma06g02842 06 52255564 52257174 ECH