Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02721 atgagagtggccacttccttgctgcttctctccaaggaatccatGGCTTTCCCCCTTGGTGGCTTTGTGGGGTTCCCTGATAATGATCCAGAGAGTGATATCCCTGTTGATGATGAAAATTTGCTTAAGAACAGACCAATATTGGATAGGGTGATTGTGGTTTCAGCTGGTGTTGTTGCTAACATCATTTTTGCATTTGTTATTATCTTTGCACAAGTCCTGTTTGTTGGTTTGCCTGAGCAAGAGGTGTTTCCTGGGGTGGTTGTGCCTGATGTCAGACCTTTTTCAGCTGCTTCAAGAGATGGGTTGGTTCCTGGGGATGTGATCCTTGAGGTCAATGGAAGTGAGTTTCCAAAACCAGGTCCTAGTGCTGTTTCTGAAGTTGTTGATGCCATCAAGAGGAACCCCAAGAGATATGTTTTGCTCAAGATTAAAAGGGGGGAGCAGAATTTTGATATAAGGGTCACCCCAGATGAGAATTTTGATGGAACCGGGAAAATTGGAGTTCAGCTAGCCCCTAATGTTAAGATAGCTAAGGTTAGGCCAAAAAATCTGGTGCAGGCTGTGGAGTTTACTGGGCAAGAGTTTTGGGGTCTGGCATCTAATGTTTTAGATGGGCTAAAGCAGACTTTTTTGAACTTCTCCCAGTCAGCTAGTAAGGTTTCGGGTCCTGTAGCCATCATTGCTGTTGGTGCAGAAGTGGCGCGGTCGAATATTGATGGTCTCTTCCAGTTTGCTGCGATACTTAATATTAACCTTGCGGTTATAAACCTTCTTCCTTTGCCTGCTTTGGATGGAGGTACATTGGCATTGATCCTCATTGAGGCTGCTAGGGGTGGGAGAAAGCTTCCTTTGGAAGTGGAGCAAACGATCATGTCTTCTGGAATTATGCTTGTTATAATTCTGGGGTTATTCCTTATTAGGAGGCAAGATCATTTTAAACGATTGAGgatttcagatgataaaggtttcccattcgattcgaccccaccaccgctgttccatactctgccttcttcaaatcgccatctcttcctttctcaccaaccaattacaaagactatggggagcaaggcaccaagttggtctgaccaatggggaagtggagggtttgccagtgaccactatgagaaggaggaagaggagaagacgaagatgaagaagagtgggagcagcaagaagatggcagatgcaaaggctgtggcatcagctgggatggataaggccaaaactgcagcagttgtgggtgcccagaagggttttctattcgattcgacccatacttcttcaaatcgccatctcatcctttctcaccaaccaattacaaagactatggcgagcgcgggcaagtttccaagtccgacTCCCCCATCGATAATAGAAGTGAAGAAGCCGCCGCCGGCGACCATAATctctggaccctctggaccctctggaacctctggaGCCTTATACAACTATGCTGGGAATGGGAATAGCAAGACCCAAACTAAGAATGGAAACCTTCTTGGCAACCGTCTTGGCAATGAAAAGTGA 1536 0.3027 MRVATSLLLLSKESMAFPLGGFVGFPDNDPESDIPVDDENLLKNRPILDRVIVVSAGVVANIIFAFVIIFAQVLFVGLPEQEVFPGVVVPDVRPFSAASRDGLVPGDVILEVNGSEFPKPGPSAVSEVVDAIKRNPKRYVLLKIKRGEQNFDIRVTPDENFDGTGKIGVQLAPNVKIAKVRPKNLVQAVEFTGQEFWGLASNVLDGLKQTFLNFSQSASKVSGPVAIIAVGAEVARSNIDGLFQFAAILNINLAVINLLPLPALDGGTLALILIEAARGGRKLPLEVEQTIMSSGIMLVIILGLFLIRRQDHFKRLRISDDKGFPFDSTPPPLFHTLPSSNRHLFLSHQPITKTMGSKAPSWSDQWGSGGFASDHYEKEEEEKTKMKKSGSSKKMADAKAVASAGMDKAKTAAVVGAQKGFLFDSTHTSSNRHLILSHQPITKTMASAGKFPSPTPPSIIEVKKPPPATIISGPSGPSGTSGALYNYAGNGNSKTQTKNGNLLGNRLGNEK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02721 511 CDD S2P-M50 16 98 - -
Gma06g02721 511 PANTHER REGULATOR OF SIGMA-E PROTEASE RSEP 15 309 IPR004387 GO:0004222|GO:0006508|GO:0016021
Gma06g02721 511 Pfam Peptidase family M50 16 302 IPR008915 GO:0004222|GO:0006508
Gma06g02721 511 CDD PDZ_metalloprotease 74 157 - -
Gma06g02721 511 PANTHER MEMBRANE METALLOPROTEASE ARASP2, CHLOROPLASTIC-RELATED 15 309 - -
Gma06g02721 511 ProSiteProfiles PDZ domain profile. 86 147 IPR001478 GO:0005515
Gma06g02721 511 SUPERFAMILY PDZ domain-like 81 159 IPR036034 GO:0005515
Gma06g02721 511 MobiDBLite consensus disorder prediction 473 511 - -
Gma06g02721 511 MobiDBLite consensus disorder prediction 467 511 - -
Gma06g02721 511 Pfam PDZ domain 88 146 IPR041489 -
Gma06g02721 511 Gene3D - 78 172 IPR036034 GO:0005515
Gma06g02721 511 SMART pdz_new 71 148 IPR001478 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02721 Gma-Chr6 50986778 51005330 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02721 - - gmx:100796242 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02721 06 50986778 51005330 Gma06g02721 06 50986778 51005330 ECH