Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02515 ATGAGTTCATTTAGCCAAAATCCCTATGTTTTAGTTCTGTTCCTCGTTCTCACTGTGTGGATATCCCGTGTAATGTCTCGCGGGCTCATTACATCTGAGAGACATGAGAAATGGATGGCACAATATGGTAAGGTTTACAAGGATGCTGCAGAGAAGGAGAAACGTTTCCAAGTATTCAAAAACAATGTGCAGTTCATTGAGTCATTCAATGCTGCTGGGGACAAACCTTTCAACCTTAGCATTAACCAATTTGCGGACCTTCATGATGAAGAATTTAAGGCTTTACTAAACAATGTTCAGAAAAAGGCAAGTAGGGTGGAGACAGCAACAGAAACATCGTTTAGGTATGAGAATGTAACTAAGATTCCTTCTACCATGGACTGGAGGAAAAGAGGTGCTGTCACTCCAATCAAGGACCAAGGCTACACATGTGGAAGTTGTTGGGCATTTGCAACTGTGGCTACTGTCGAGAGTCTCCATCAAATAACTACAGGTGAATTGGTGTCCCTATCAGAGCAAGAACTAGTAGATTGTGTTAGAGGTGACAGTGAAGGTTGCCGTGGTGGTTATGTGGAAAATGCCTTTGAATTTATTGCTAATAAAGGTGGAATAACAAGTGAAGCATACTATCCTTACAAAGGAAAAGATAGAAGTTGTAAGGTTAAGAAGGAGACTCATGGTGTGGCACGGATTATAGGGTATGAGAGTGTTCCTTCTAATAGTGAAAAGGCACTCCTAAAAGCTGTGGCAAATCAACCAGTTTCAGTTTATATTGATGCAGGAGCAATTGCTTTCAAATTTTACTCAAGTGGGATTTTTGAAGCAAGAAATTGTGGAACTCATCTAGACCATGCTGTTGCAGTTGTTGGTTATGGTAAACTTCGTGATGGTACAAAGTATTGGCTAGTAAAAAATTCATGGAGCACTGCATGGGGTGAGAAAGGGTACATGAGGATCAAGCGAGACATACGTGCCAAGAAAGGCTTATGTGGAATTGCTTCAAATGCCTCTTATCCAATCGCTTAA 1026 0.4094 MSSFSQNPYVLVLFLVLTVWISRVMSRGLITSERHEKWMAQYGKVYKDAAEKEKRFQVFKNNVQFIESFNAAGDKPFNLSINQFADLHDEEFKALLNNVQKKASRVETATETSFRYENVTKIPSTMDWRKRGAVTPIKDQGYTCGSCWAFATVATVESLHQITTGELVSLSEQELVDCVRGDSEGCRGGYVENAFEFIANKGGITSEAYYPYKGKDRSCKVKKETHGVARIIGYESVPSNSEKALLKAVANQPVSVYIDAGAIAFKFYSSGIFEARNCGTHLDHAVAVVGYGKLRDGTKYWLVKNSWSTAWGEKGYMRIKRDIRAKKGLCGIASNASYPIA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02515 341 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 282 292 IPR025660 -
Gma06g02515 341 SUPERFAMILY Cysteine proteinases 32 340 IPR038765 -
Gma06g02515 341 Pfam Cathepsin propeptide inhibitor domain (I29) 35 92 IPR013201 -
Gma06g02515 341 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 300 319 IPR025661 -
Gma06g02515 341 PRINTS Papain cysteine protease (C1) family signature 141 156 IPR000668 GO:0006508|GO:0008234
Gma06g02515 341 PRINTS Papain cysteine protease (C1) family signature 284 294 IPR000668 GO:0006508|GO:0008234
Gma06g02515 341 PRINTS Papain cysteine protease (C1) family signature 300 306 IPR000668 GO:0006508|GO:0008234
Gma06g02515 341 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 26 340 - -
Gma06g02515 341 CDD Peptidase_C1A 123 339 IPR039417 -
Gma06g02515 341 Pfam Papain family cysteine protease 122 340 IPR000668 GO:0006508|GO:0008234
Gma06g02515 341 Gene3D Cysteine proteinases 18 341 - -
Gma06g02515 341 SMART Inhibitor_I29_2 35 92 IPR013201 -
Gma06g02515 341 PANTHER SENESCENCE-ASSOCIATED GENE 12 26 340 - -
Gma06g02515 341 SMART pept_c1 122 340 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02515 Gma-Chr6 48083221 48084575 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02515 - K16292 gmx:100799247 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02515 06 48083221 48084575 Gma06g02515 06 48083221 48084575 ECH
Gma12g01180 12 15130274 15131662 Gma06g02515 06 48083221 48084575 GST