Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02388 ATGCCTGAGGCACCGAGAGACTACAACCTTTTGGAGCAAAACAAGAAAACCCTCGAGTTCATTGAGGATGTCACTGCCAACGCAGACCAAGTTCAGAAGAGGGTCCTCTCCGAAATCCTCTCCAACAATGCAAACGTTGAGTACCTCAAGAGACACGGCCTCCATGGCCAAACCGACCGCGAAACCTTCAAGAAACTCTTGCCTGTCATAACCTACGAGGACATCCAACCCGACATCAACCGCATCGCCAATGGCGATACTTCTCCAATCCTTTGCTCCAAACCCATTTCAGAATTCCTCACTAGTTCTGGGACATCAGGAGGTGAGAGGAAGCTGATGCCAACAATTGAAGAAGAGCTAGGTAGAAGGAGTTTGCTGTATAGCCTTCTGATGCCAGTGATGAGCCAGTTTGTTCCTGGTTTAGAAAAGGGCAAAGGAATGTACCTAATGTTCATTAAATCCGAGGCCAAAACCCCCGGTGGAATTGTGGCTCGTCCAGTTCTCACCAGCTACTACAAAAGCTCATACTTCAAAGACAGACCCTACGACCCTTACACCAACTACACCAGCCCCAACGAGACCGTCCTCTGCCCGGACTCCTACCAGAGCATGTACTCCCAACTCCTCTGCGGCCTTTGCCAGCACAAGGAGGTCCTCCGTGTCGGCGCCGTCTTCGCCTCCGGCTTCATAAGGGCCATCCGCTTCCTCGAGAAGCACTGGCCCTTACTTTGTCATGATATCCGAACGGGTACCATTGACAATACGGTCACGGACCTGTCGGTCCGTGACGCTGTGATGAAGATCCTCAAGCCTGACGCCAGGCTTGCGGATCTCATCCAGAGTGAGTGTGGGAAGAGCTCCTGGCAGGGAATCATCACCAGGCTGTGGCCCAACACTAAGTATGTGGATGTGATTGTGACTGGGACAATGTCACAGTACATCCCCACGTTGGACTACTACAGCAATGGACTCCCACTTGTGTGCACCATGTATGCGTCTAGTGAGTGCTACTTTGGTGTCAATCTTAACCCTCTTTGCAAACCTAGTGAGGTCTCTTACACCCTCATTCCCACCATGTGCTACTTCGAGTTCTTGCCTGTTAATAGAAGCAATGGGGTGTCCCATGACAATCTCCACACCCCTAGATCCCTCAATGAGAAGGAACAGAAGGAGCTCGTTGAGCTTGTTGATGTCAAACTTGGCCAAGAATATGAACTTGTGGTCACAACTTATGCTGGTTTGTATCGTTACAGAGTTGGTGATGTGCTGAGGGTGGCTGGATTCAAGAACAAGGCACCCCAATTCAACTTTGTGTGCAGAAAGAACGTGGTGTTGAGCATAGACTCAGACAAGACCGATGAGGTTGAGCTCCAGAACGCAATGAAGAATGCCGTGACACACTTGGTGCCCTTTGATGCATCAGTGTCCGAGTACACCAGCTATGCAGACACCACAACAATCCCTGGCCACTATGTCTTGTACTGGGAACTCTCCCTGAAAGGCTCAACCCCAATTCCACCATGTGTTTTTGAGGATTGTTGCTTAACCATAGAGGAATCACTGAACAGTGTGTATCGCCAAGGTCGAGTTTCGGACAAATCGATCGGGCCACTTGAGATCAAGATTGTGGAACAGGGGACTTTTGATAAGCTCATGGACTATGCCATAAGCTTAGGTGCTTCAATAAATCAGTACAAGACTCCAAGGTGTGTGAAGTTTGCACCTGTGCTGGAGCTCTTGAACTCAAGGGTGGTGGAGAAGTATTTTAGTCCAAAATGTCCAAAATGGGTTCCGGGACACAAGCAGTGGATCAACCAGAATTCATCATGA 1830 0.4951 MPEAPRDYNLLEQNKKTLEFIEDVTANADQVQKRVLSEILSNNANVEYLKRHGLHGQTDRETFKKLLPVITYEDIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSYFKDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWPLLCHDIRTGTIDNTVTDLSVRDAVMKILKPDARLADLIQSECGKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRSNGVSHDNLHTPRSLNEKEQKELVELVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMKNAVTHLVPFDASVSEYTSYADTTTIPGHYVLYWELSLKGSTPIPPCVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVLELLNSRVVEKYFSPKCPKWVPGHKQWINQNSS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02388 609 Pfam GH3 auxin-responsive promoter 21 572 IPR004993 -
Gma06g02388 609 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 604 IPR004993 -
Gma06g02388 609 PANTHER BNAC03G14570D PROTEIN 7 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02388 Gma-Chr6 45742100 45745123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02388 9 590 EF-hand Containing Proteins AT1G23160 49.577 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02388 K14487 - gmx:100791987 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02388 06 45742100 45745123 Gma06g02388 06 45742100 45745123 ECH