Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02387 ATGGATCATGCGGTTTGCATATGGAATGTATGGAGCAGAAATCAGAAGAAAGCATGCCTGCTAAACTTCCACAATGCAGCAGTCAAAGATGTGAAATGGTATCAGCAAGGGCACTTTCTACTTTCTTGTGGATATGATTGCACGTCAAGGTTGATTGATGTTGAAAAAGGATTGGAGACTCAGGTTTTCAGACAAGATCAAATCGTTGGAGTTATAAAGTTACATCCAGACGATTCAAATCTCTTCCTTTCTGAAGGGTCAAAGGGCCAGATCAAACTTTGGGATGTCAGAACTGGCAAAGTAGTGCATGACTATAATCAAAATTTAGGTCTGATTCTGGATGTTGAGTTCACTATGAATGGGAAGCAATTCATTTCTTCTAGTGATGTATCTCAAAGTAATGCAAGTGAGAATGCTATTATTGTTTGGGATGTGTCAAGAGAGGTACCATTGTCTAATCAGGTTTATGTGGAAGCTTATACGTGTCCCTGTGTGAGGCGCCACCAATTTGATTCAATTTTTGTTTCTCAATCAAATGGGAATTATGTTGTAATCTTTACTACCACCCCACCTTACAGACTCAACAAATATAAGCAATATGAGGGCCATGTGGTCTCTGGGTTCCCAATCAAGTGCAATTTCAGCTTGGACGGGAAAAAACTCGCTTCTGGCTCTTCAGATTGTTCTATCTACATTTATGATTATCAGTTGTGA 714 0.395 MDHAVCIWNVWSRNQKKACLLNFHNAAVKDVKWYQQGHFLLSCGYDCTSRLIDVEKGLETQVFRQDQIVGVIKLHPDDSNLFLSEGSKGQIKLWDVRTGKVVHDYNQNLGLILDVEFTMNGKQFISSSDVSQSNASENAIIVWDVSREVPLSNQVYVEAYTCPCVRRHQFDSIFVSQSNGNYVVIFTTTPPYRLNKYKQYEGHVVSGFPIKCNFSLDGKKLASGSSDCSIYIYDYQL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02387 237 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 236 - -
Gma06g02387 237 ProSiteProfiles Trp-Asp (WD) repeats profile. 62 104 IPR001680 GO:0005515
Gma06g02387 237 SMART WD40_4 14 53 IPR001680 GO:0005515
Gma06g02387 237 SMART WD40_4 56 95 IPR001680 GO:0005515
Gma06g02387 237 SMART WD40_4 98 144 IPR001680 GO:0005515
Gma06g02387 237 SMART WD40_4 193 234 IPR001680 GO:0005515
Gma06g02387 237 Gene3D - 1 237 IPR015943 GO:0005515
Gma06g02387 237 SUPERFAMILY WD40 repeat-like 2 235 IPR036322 GO:0005515
Gma06g02387 237 Pfam WD domain, G-beta repeat 23 52 IPR001680 GO:0005515
Gma06g02387 237 Pfam WD domain, G-beta repeat 198 234 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02387 Gma-Chr6 45713810 45719939 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02387 K24742 - gmx:100800836 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02387 06 45713810 45719939 Gma06g02387 06 45713810 45719939 ECH