Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02342 ATGGAAATTGACTATGGTTTCGACTTTGAGGACTGCTTCCCTTCGATGATTGCGCGGTTGGGCGCGGAAGGGTTCATTGGGGAGCTTTGCAACGGGTTCCAGTTGCTCATGGATGTGAACATGGGGCTCATAACGTTCGAGAGCTTGAAGATGAGCACTAACTTGCTTGGTTTGGAGGTTAGGGATGATGAGTTGTTGTGCATGCTCATGGAAGGTGATTTGGATGGAGATGGGGCCCTTAACCAGATGGAGTTTTGCATTCTCATGTTTAGGTTGAGTCCATGCTTGATGGATATGCAAGGTCCTGAATAG 312 0.4808 MEIDYGFDFEDCFPSMIARLGAEGFIGELCNGFQLLMDVNMGLITFESLKMSTNLLGLEVRDDELLCMLMEGDLDGDGALNQMEFCILMFRLSPCLMDMQGPE 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02342 103 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Gma06g02342 103 SUPERFAMILY EF-hand 24 96 IPR011992 -
Gma06g02342 103 Pfam EF-hand domain pair 42 91 IPR002048 GO:0005509
Gma06g02342 103 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 4 99 - -
Gma06g02342 103 PANTHER CALCIUM-BINDING PROTEIN KIC 4 99 IPR044205 GO:0005509
Gma06g02342 103 Gene3D - 7 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02342 Gma-Chr6 44475900 44476511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02342 8 98 EF-hand Containing Proteins AT4G27280 60.215 6.69e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02342 K24345 - gmx:100795879 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02342 06 44475900 44476511 Gma06g02342 06 44475900 44476511 ECH