Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02296 ATGGAAACCCCGTCTTCAAATGGATCGGTTTCGAAGCGTTCGCTGAGGAGGAAGGTGAATTTGAGGAACTATGATGAGGATCTGATGGATGAGATGTTTGAGAAGCAGTTGGGAGGTGGTTTGAAGAAGAGGAGTAGGACTAAGGAAGATTTGGAGAAGGAAACTGAGACTGAGGCTATGATTGCGATGTCGCTCGGTTTTCCTATTGATGCTTTGCTTGAGGAGGAGATTAAAGCTGGGGTTGTGAGGGAGTTGGGTGGGAAGGAGCAGAATGATTATATAGTCATAAGGAATCATATATTGGCTCTGTGGAGGAGGGGGAATGTCAGGTTGTGGTTGAGTAAAGGGATGGTTAGAGAAACTGTGAGCAATGAGTATGATCATTTGATTAATTCTGCTTATGACTATCTTTTGTATAACGGCTACATAAATTTTGGCGTTTCACCCGCGTTTACTTCTCAGTTGCCCGAGTCAACTGAGGGGACTGCGGTTGTTATTGGTGCTGGCCTTGCCGGGCTGGCAGCAGCGAGGCAACTCTTGTCGTTTGGTTACAAGGTTGTGGTTTTGGAAGGCAGGAGCCGGCCTGGTGGTCGAGTTTATACTCAGAAGGTGGGGCGCGAGGGTAAGTTTGCTTCCATTGATCTTGGTGGGAGTATTATTACAGGCATTCATGCTAACCCTTTAGGGGTTCTGGCTCGACAGCTTTCTATACCACTTCATAAAGTCAGAGATGATTGCCCTTTGTATAAGCCAAATGGGGCACCGGTTGATAAGGAAACGGATGCAAGCGTTGAATTTGTATTCAATAAGTTGCTTGACAAGGTTATGGAGTTGAGGCAAATTATGGGTGGGTTCGCAAGTGATACCTCTCTTGGTTCGGTCTTGGAGATGCTCAGGCGGTTGTATAATGTGACCCGAAGTACAGATGAGAAGCAGTTGCTTGATTGGCATCTTGCAAATTTGGAATATGCAAATGCTGGGTGCCTTTCAAATCTTTCGGCTGCCTATTGGGATCAAGATGATCCTTATGAAATGAGCGGTGATCATTGCTTTCTTGCTGGAGGAAATATGGGGTTGATAAAAGCTTTATGTGAAGGAGTTCCTGTTTTTTATGGAAAGACCGTCAATACTATCAGATATGGAAATGAGGGTGTTGAGGTTATTGCTGGGGAACATGTCTTTCAAGCAGATATCGCCTTATGCACTGTGCCTCTTGGAGTTCTTAAAAAGAAGGCCATCAGTTTTGAACCTGAATTGCCTGCAAGGAAATTGGAAGCAATTGAGAGGATGGGGTTTGGGCTGCTGAACAAGGTTGCTATGGTTTTTCCTCATGTGTTTTGGGGGGAAGATCGAGACACATTTGGATGTCTCAATGAACATAGTCATCAACGTGGGGAATTTTTCCTATTTTACTGTTACCATACAGTTTCTGGAGGTCCAGCACTTATTGCGCTGGTGGCTGGTGAAGCTGCACAAGCCTTTGAATCCACAGATGCTTCCATTTTGCTGCATCGGGTTTTGACCGTGTTAAAAGGAATATTTCATCCCAAAGGCATCATTGTGCCTGATCCAATACAGTCAATTTGTACAAGATGGGGCAGTGATCCCCTTTCATATGGTTCCTACTCTCATGTTAGCGTTAATTCATCTGGTGCCGATTATGATATACTCGCTGAAAACGTGGGGAATAGATTGTTCTTTGCTGGTGAGGCCACGAGTAGGCAATACCCAGCTACTATGCATGGTGCTTTCTTGAGTGGCTTAAGGGAAGCATCACACATTTACCGATCAGCTCGGATTCAAAACAATCCTAGGAAGTGCATGCCTAAGAATATCGTAAGCAATGACATCCTGGGTGATTTATTCAAGTGGCCTGATTTGGAATTTGGGAAGTTTGCTTTCATTTTTTATCCGTCTCCAGAAAATCTGCAGTCAACGGGGCTTCTGCAAGTCACTATTGGTGATGCTGAAGAAATTTATGAGGAGCTGTTTAGCAGCTACCCAAATGCAGCAAAGTGGCCCTTGCAGCTGTACACTATAATATCCCGTGAACAAGCCCAGCAGCTACAAAAAGTTGAGGGAGGGAATGAAAGCCGGTTATCCTTTTTGGTAAAAACCCTTGGCTTAAAGCTTATGGGGCCAAATGCTTTGCTTACTGCAGGCAACACATTGATAGCTAGCATAGCTCATTCACGGAAAGGCCGGTGGAGGAACCGTGTAATTACTTGTTAA 2232 0.4476 METPSSNGSVSKRSLRRKVNLRNYDEDLMDEMFEKQLGGGLKKRSRTKEDLEKETETEAMIAMSLGFPIDALLEEEIKAGVVRELGGKEQNDYIVIRNHILALWRRGNVRLWLSKGMVRETVSNEYDHLINSAYDYLLYNGYINFGVSPAFTSQLPESTEGTAVVIGAGLAGLAAARQLLSFGYKVVVLEGRSRPGGRVYTQKVGREGKFASIDLGGSIITGIHANPLGVLARQLSIPLHKVRDDCPLYKPNGAPVDKETDASVEFVFNKLLDKVMELRQIMGGFASDTSLGSVLEMLRRLYNVTRSTDEKQLLDWHLANLEYANAGCLSNLSAAYWDQDDPYEMSGDHCFLAGGNMGLIKALCEGVPVFYGKTVNTIRYGNEGVEVIAGEHVFQADIALCTVPLGVLKKKAISFEPELPARKLEAIERMGFGLLNKVAMVFPHVFWGEDRDTFGCLNEHSHQRGEFFLFYCYHTVSGGPALIALVAGEAAQAFESTDASILLHRVLTVLKGIFHPKGIIVPDPIQSICTRWGSDPLSYGSYSHVSVNSSGADYDILAENVGNRLFFAGEATSRQYPATMHGAFLSGLREASHIYRSARIQNNPRKCMPKNIVSNDILGDLFKWPDLEFGKFAFIFYPSPENLQSTGLLQVTIGDAEEIYEELFSSYPNAAKWPLQLYTIISREQAQQLQKVEGGNESRLSFLVKTLGLKLMGPNALLTAGNTLIASIAHSRKGRWRNRVITC 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02296 743 SUPERFAMILY FAD-linked reductases, C-terminal domain 431 544 - -
Gma06g02296 743 Gene3D - 245 550 - -
Gma06g02296 743 SUPERFAMILY FAD/NAD(P)-binding domain 161 596 IPR036188 -
Gma06g02296 743 ProSiteProfiles SWIRM domain profile. 52 154 IPR007526 GO:0005515
Gma06g02296 743 PANTHER FLAVIN MONOAMINE OXIDASE 37 735 - -
Gma06g02296 743 SUPERFAMILY Homeodomain-like 54 157 IPR009057 -
Gma06g02296 743 Pfam Flavin containing amine oxidoreductase 170 594 IPR002937 GO:0016491
Gma06g02296 743 Gene3D - 164 593 IPR036188 -
Gma06g02296 743 Pfam SWIRM domain 70 145 IPR007526 GO:0005515
Gma06g02296 743 Gene3D - 57 156 IPR036388 -
Gma06g02296 743 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 37 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02296 Gma-Chr6 42815412 42819979 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Gma06g02296 Amino_oxidase 6.1e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02296 - - gmx:100809901 1465.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02296 06 42815412 42819979 Gma06g02296 06 42815412 42819979 ECH