Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02273 ATGCATCGTTCCTTGTCCATGAACATCCGATCAAGGTTTCTCAGCCACCAAATGATATCAGAGGTGAATCAAGTGGTGAGAAATGGAGTTATTTTGGATCCATGTGACGTGTTCATAAACCACAGAAGCTTGGACACAAAAACAACAGTAGCCGCTCCTCTTTATGACCATCTCCGCAGACATGGCTTTCACCCTTTTTTGGACAACAAAACAATGAAACCAGGTGACAAACTGTTTGATAAGATCAACAGGGCAATCTTGGAGTGCAAGATAGGGTTGGCAGTGATGTCACCGCGTTACTGTGACTCATACTTTTGCCTTCATGAGCTTGCCCTTCTCATGGAGTGCAAGAAGAAGGTGATACCAATCTTTGTTGACATTAAGCCATCTCAATTACGCGTCATCAACAACAAAAAATGGACCCTAGAAGATCAACGGCGTTTCAAATTGGCTATTGAAGAAGCAAAGTACACTGTGGGACTCACCTTCAACTCTTTGCAAGGCGTAGGAACTTCTCCGGTATTGTGA 528 0.4356 MHRSLSMNIRSRFLSHQMISEVNQVVRNGVILDPCDVFINHRSLDTKTTVAAPLYDHLRRHGFHPFLDNKTMKPGDKLFDKINRAILECKIGLAVMSPRYCDSYFCLHELALLMECKKKVIPIFVDIKPSQLRVINNKKWTLEDQRRFKLAIEEAKYTVGLTFNSLQGVGTSPVL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02273 175 SMART till_3 34 162 IPR000157 GO:0007165
Gma06g02273 175 Gene3D - 13 158 IPR035897 -
Gma06g02273 175 ProSiteProfiles TIR domain profile. 33 156 IPR000157 GO:0007165
Gma06g02273 175 PANTHER COP-1 INTERACTING PROTEIN 1 169 - -
Gma06g02273 175 Pfam TIR domain 36 133 IPR000157 GO:0007165
Gma06g02273 175 SUPERFAMILY Toll/Interleukin receptor TIR domain 35 133 IPR035897 -
Gma06g02273 175 PANTHER COP1-INTERACTING PROTEIN-RELATED 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02273 Gma-Chr6 42444041 42447968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02273 37 164 Miscellaneous Gene Families AT1G57670 29.577 1.93e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02273 - - gmx:100526930 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02273 06 42444041 42447968 Gma06g02273 06 42444041 42447968 ECH