Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02180 ATGGGAGGTTCCACCCCCGTACAGAGCCCAGAGCTGCCTGCATCGACATGGCTCGAGTCCATCAACCTCTTGAAAGAGGAGGACCCGCTATTAGAAACATCATCACGCACCTCCTTTGACAAGGAATTGCCAATGGGAAGTTGGGAACTATTCTCGCTCCTCCAAGGGTTGTCGGAGAGAACCCCCAGAGTCACTTTCGCCCATACCCAACGCGGACCCAAGTCGCTGCCATGCACGACATCGACGTTTTGGCTTCACGACCTCGACCCTCAAGCTCTCTCCAAAGCCTCCTCTTCCATCTCTTCCTCCATCAACCGTTTCGTTTCCAAAAACCACATCTCTCAGGCTGCGGGTGCTGATGCTTTGAAACGACTGCGTCTCACGACGGATTTGGAGGATTTACAGCTAGCGGATTTGATCATTGAGGCGATTGTGGAATCCGAAGATGTGAAAAAGAGTTTGTTTGCGCAACTCGATAGGATTGCCAATAGTTCTGCGATTTTGGCGTCCAACACCAGTTCCATTTCCGTCACGCGTCTAGCAACCCCTACCAGCAGGCCATGTCAGGTGATAGGAATGCATTTTATGAATCCACCTCCTGTGATGAAATTGATTGAGATTGTACGAGGTGCAGACACTTCTGAGGAGACATTCGTTGCTACGAAAGCATTGCTGGGCAAGGTAGTGATAACCTCCCATGATTATTCAGGCTTCATACATTTTTTTGCTCTCTACACTGGTGTTGCAACCAAAGAGGATATTGACACAGGAATGAAGCTGGTTACTAACCATCCAATGGGTCCTTTAGAGCTTGCAGACTTCATTGGATTGGATGTGTGCTTGTCAATAATGAGAGTTCTTCATGCTGGCCTTGGTGACAACAAATATGCACCTTGCGCTCTACTTGTGCAGTATGTTGATGCTGGAAGACTTGGAAGAAAACGAGGTATTGGTGTGTATGAATATAGTAAAGATCCAAGGTCTACAAAATCATCTTCCCGTCTCTAA 1008 0.4782 MGGSTPVQSPELPASTWLESINLLKEEDPLLETSSRTSFDKELPMGSWELFSLLQGLSERTPRVTFAHTQRGPKSLPCTTSTFWLHDLDPQALSKASSSISSSINRFVSKNHISQAAGADALKRLRLTTDLEDLQLADLIIEAIVESEDVKKSLFAQLDRIANSSAILASNTSSISVTRLATPTSRPCQVIGMHFMNPPPVMKLIEIVRGADTSEETFVATKALLGKVVITSHDYSGFIHFFALYTGVATKEDIDTGMKLVTNHPMGPLELADFIGLDVCLSIMRVLHAGLGDNKYAPCALLVQYVDAGRLGRKRGIGVYEYSKDPRSTKSSSRL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02180 335 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 241 328 IPR008927 -
Gma06g02180 335 Pfam 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 243 322 IPR006108 GO:0006631|GO:0016491|GO:0016616
Gma06g02180 335 Gene3D - 240 334 IPR013328 GO:0016491
Gma06g02180 335 Gene3D - 79 239 - -
Gma06g02180 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 84 226 IPR036291 -
Gma06g02180 335 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 84 326 - -
Gma06g02180 335 Pfam 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 85 228 IPR006176 GO:0006631|GO:0070403
Gma06g02180 335 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 84 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02180 Gma-Chr6 39505117 39509341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02180 115 322 Acyl Lipid Metabolism Gene Families AT3G15290 71.622 3.10e-113 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02180 K00074 - gmx:100170753 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02180 06 39505117 39509341 Gma06g02180 06 39505117 39509341 ECH