Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02158 ATGGCAGCATCAGTTTCATGCTCATGGCTAACTCTTCCGTCCCAAATGAGGAAACTTTCCCTCACATCCTCTTCTTCTTCTCTTTCCATCTCCAATTCTGCTTCTCTCAGTTTCTCCAGAAACCTCTCACACCCTCTCTTCTCACAAGGTAACTGCTTGTCGCTGAGCACAGTGCAGAGGCGCGCGTCTGTGGTCTGCGAGGCTGCGCCGAAAAAGGTGGATTCGGCTGTGAAGAGAGCGCGCCAAGCCGAGAAGCGCCGCGTGTACAACAAAGCTCGGAAATCGGAGATTAAAACACGCACCAAGAAGGTTTTGGAGGCTCTGGAAGTGCTTAAGAAGAAACAAGATGCGCAGGCCGAAGAAATCCTCTCCATTGAGAAGTTGATCGGAGAGGCATACTCGATAATTGACAAAGCTGTGAGAGTAGGCACACTGCACAGGAACACTGGAGCTAATCGCAAGTCTCGGCTTGCTCGAAGAAAGAAGGCAGTGGAGATCCATCATGGCTGGTATACCCCAACTCCTGAAGCCAGTGTCTGA 540 0.5093 MAASVSCSWLTLPSQMRKLSLTSSSSSLSISNSASLSFSRNLSHPLFSQGNCLSLSTVQRRASVVCEAAPKKVDSAVKRARQAEKRRVYNKARKSEIKTRTKKVLEALEVLKKKQDAQAEEILSIEKLIGEAYSIIDKAVRVGTLHRNTGANRKSRLARRKKAVEIHHGWYTPTPEASV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02158 179 SUPERFAMILY Ribosomal protein S20 74 176 IPR036510 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gma06g02158 179 Hamap 30S ribosomal protein S20 [rpsT]. 61 163 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gma06g02158 179 Gene3D Ribosomal protein S20 73 179 IPR036510 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gma06g02158 179 TIGRFAM S20: ribosomal protein bS20 72 159 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gma06g02158 179 Pfam Ribosomal protein S20 74 160 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gma06g02158 179 PANTHER 30S RIBOSOMAL PROTEIN S20, CHLOROPLASTIC 1 178 - -
Gma06g02158 179 PANTHER 30S RIBOSOMAL PROTEIN S20 1 178 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02158 Gma-Chr6 38783813 38787098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02158 K02968 - gmx:100786192 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02158 06 38783813 38787098 Gma06g02158 06 38783813 38787098 ECH