Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01963 ATGGATTGGGTCTCAAAAACTATCAAACCAATGCAATTCAGACAAAATCTAACGGAACTCATCAGTGTTGGCTTAATTGCATCATTCACTCTTGTAATGTGGAAAGGGTTAATGTGTGTTACCGGTAGTGGAACACCTGTTGTTGTTGTTATCTCTGGTAGCATGGAACCAGGATTCCGAAGAGGTGATATTTTGTTCTTACACATGAGCAAAGATCCTATTCGCGCAGGAGACATCGTGGTTTACAATCTAGATGGTAGAGATATCCCAATTGTTCACCGAGTAATTGAGGTTCATGAACGTCAAGATATTGAAGAAACTCATATCCTCACAAAAG 337 0.3976 MDWVSKTIKPMQFRQNLTELISVGLIASFTLVMWKGLMCVTGSGTPVVVVISGSMEPGFRRGDILFLHMSKDPIRAGDIVVYNLDGRDIPIVHRVIEVHERQDIEETHILTK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01963 112 TIGRFAM sigpep_I_arch: signal peptidase I 18 103 IPR001733 GO:0006465|GO:0008233|GO:0016020
Gma06g01963 112 CDD S26_SPase_I 46 98 IPR019533 GO:0004252|GO:0006465
Gma06g01963 112 Gene3D Umud Fragment, subunit A 37 109 - -
Gma06g01963 112 PANTHER SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 2 112 IPR001733 GO:0006465|GO:0008233|GO:0016020
Gma06g01963 112 Pfam Peptidase S24-like 32 100 IPR015927 -
Gma06g01963 112 PANTHER SIGNAL PEPTIDASE I 2 112 - -
Gma06g01963 112 SUPERFAMILY LexA/Signal peptidase 32 96 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01963 Gma-Chr6 23171148 23198693 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01963 K13280 - oeu:111399390 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01963 06 23171148 23198693 Gma06g01963 06 23171148 23198693 ECH