Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01953 ATGGGGACCACGACGAACGACAACAACAACAACTCCAATTCTACCTCAAAATCTGATGCCAATGACAACAAGAACAACAACACACGTGTGGTGTTGAATGTCTATGACCTCACCCCTCTCAATAATTACCTTTATTGGTTAGGGTTTGGAATCTTTCACTCCGGCATTGAAGTACACGGTAGGGAGTATGGATTTGGAGCCCATGATTTCCCAACAAGTGGAGTATTTGAAGTGGAGCCAAGGAAGTGCCCTCGATTTGTGTACAGATGTTCTGTTACTTTAGGCCATGTAAATATGCATCCTTCTGAGTTTCGGACATTTATTGAAAGTATAGCCAATGAGTATCATGGGGATACCTATCACCTTATTTCTAAGAACTGCAATCATTTTACGAATGATATGTCTCATAGATTGAATGGAAAACGGATCCCAGGTTGGGTGAATCGGCTTGCTAGACTAGGTTCATTTTGTAGCTGTCTACTTCCTGAATGTGTGGAAGTAACAACTGTTAAACAGCTACCAGAATATCATGAATGTTCAGTGTTAGCAGAAGATGAAATCATTGAGTCTCTTTCGACTGCCTCGCCTTGTGGATCTCAATCAACATCAGGATTAGATGATGATCAAGAAAAGCGCCTTCTGTCACCTCTGGCTAATAAAACAGATAACCTTTCTTTTGTTAAAGAGGCCCCACTAAAATGA 702 0.4103 MGTTTNDNNNNSNSTSKSDANDNKNNNTRVVLNVYDLTPLNNYLYWLGFGIFHSGIEVHGREYGFGAHDFPTSGVFEVEPRKCPRFVYRCSVTLGHVNMHPSEFRTFIESIANEYHGDTYHLISKNCNHFTNDMSHRLNGKRIPGWVNRLARLGSFCSCLLPECVEVTTVKQLPEYHECSVLAEDEIIESLSTASPCGSQSTSGLDDDQEKRLLSPLANKTDNLSFVKEAPLK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01953 233 MobiDBLite consensus disorder prediction 194 217 - -
Gma06g01953 233 MobiDBLite consensus disorder prediction 1 25 - -
Gma06g01953 233 PANTHER DESUMOYLATING ISOPEPTIDASE 8 233 IPR008580 GO:0008233
Gma06g01953 233 SMART DUF862_2a 28 170 IPR008580 GO:0008233
Gma06g01953 233 Pfam PPPDE putative peptidase domain 29 163 IPR008580 GO:0008233
Gma06g01953 233 Gene3D PPPDE domains 23 176 IPR042266 -
Gma06g01953 233 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 8 233 - -
Gma06g01953 233 ProSiteProfiles PPPDE domain profile. 28 165 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01953 Gma-Chr6 22828892 22832347 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01953 K22763 - gmx:100810582 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01953 06 22828892 22832347 Gma06g01953 06 22828892 22832347 ECH
Gma04g01414 04 32998811 33001723 Gma06g01953 06 22828892 22832347 GST