Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01940 ATGGCAACGTCCAACCTCTCCCACCAAACTGCACGGCCGTTCCCCACAGCGTGCGTCAGTTCCCGGCCACCAAGCGCCGCCGTTAACCTCCGGCGGCACCTCCCACCTCCTCCCAAGCCCAGAAAACTGACCCTCAAAACCAACAACCGCTCCAAGTGGGCCATTCAATTGAGCCTAGTGGAGCAAAGCCCACCAAAATCAACGTTCAACATGCAGCAACTCGTGGGCTTTCTCTACGACGATCTAACCCACCTCTTCGACGATCAAGGTATCGATCAAACGGCCTACGACGAACGCGTCTTCTTTCGAGACCCAATCACCAAACACGACACTTTGAGTGGCTACCTCTTCAACATTGCACTTCTAAAAAATCTCTTCAGGCCCCAATTTCAGTTGCATTGGGTCAAACCGACAGGACCGTATGAGATAACTACACGGTGGACCATGGTTATGAAATTCGTGCTACTTCCTTGGAAACCGGAACTGATCTTTACAGGAACTTCCGTTATGGGCATTAACCCAGAAAATGGCAAGTTCTGTAGCCACGTGGACTTTTGGGATTCAATAGAGAAAAATGAGTATTTTTCTTTTGAAGGTTTGTTGGATGTAATCAAACAGTTGAGGATTTATAAGACACCAGAATTGGAATCACCCAAATATCAAATATTGAAAAGGACGGAAAATTATGAGGTTAGACAGTACAATCCATTCATAGTAGTAGAAACAAATGGAGACAAGCTATCTGGGTCTACTGGCTTCAATGATGTTGCTGGATATATATTTGGAAAGAATTCCACAACAGAGAAGATACCAATGACTACTCCTGTATTCACGGAAACCAATGATGCTGACCTGTCCAAAGTGTCAATCCAAATAGTTCTTCCATTAGACAAAGAAACAGAAAGTTTACCAAATCCTAATCAAGAAACAGTTCGCTTGAGAAAGGTTGAAGGAGGCATTGCTGCAGTAATGAAGTTTAGTGGAAAGCCCACAGAGGATACTGTTCGTGAAAAGGAGAAAACCCTGCGTGCCAATATCATTAAAGATGGTCTTAAGCCTCAATCTGGTTGTTTGCTTGCACGGTACAATGATCCAGGTCGAACATGGACCTTTATAATGGTCTTCTATTGTAGAATTACTCCATGTTCAACGATGATCTATTTTTTCCTTTGGAAAGTTGTTACCTTAATTTGA 1194 0.438 MATSNLSHQTARPFPTACVSSRPPSAAVNLRRHLPPPPKPRKLTLKTNNRSKWAIQLSLVEQSPPKSTFNMQQLVGFLYDDLTHLFDDQGIDQTAYDERVFFRDPITKHDTLSGYLFNIALLKNLFRPQFQLHWVKPTGPYEITTRWTMVMKFVLLPWKPELIFTGTSVMGINPENGKFCSHVDFWDSIEKNEYFSFEGLLDVIKQLRIYKTPELESPKYQILKRTENYEVRQYNPFIVVETNGDKLSGSTGFNDVAGYIFGKNSTTEKIPMTTPVFTETNDADLSKVSIQIVLPLDKETESLPNPNQETVRLRKVEGGIAAVMKFSGKPTEDTVREKEKTLRANIIKDGLKPQSGCLLARYNDPGRTWTFIMVFYCRITPCSTMIYFFLWKVVTLI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01940 397 Gene3D Regulatory factor, effector binding domain 214 373 IPR011256 -
Gma06g01940 397 SUPERFAMILY NTF2-like 81 187 IPR032710 -
Gma06g01940 397 MobiDBLite consensus disorder prediction 1 16 - -
Gma06g01940 397 MobiDBLite consensus disorder prediction 1 44 - -
Gma06g01940 397 PANTHER HEME-BINDING PROTEIN-RELATED 54 373 IPR006917 -
Gma06g01940 397 Pfam Uncharacterized conserved protein (DUF2358) 73 182 IPR018790 -
Gma06g01940 397 PANTHER SOUL HEME-BINDING FAMILY PROTEIN 54 373 - -
Gma06g01940 397 SUPERFAMILY Probable bacterial effector-binding domain 206 368 IPR011256 -
Gma06g01940 397 Pfam SOUL heme-binding protein 215 366 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01940 Gma-Chr6 22390367 22396500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01940 - - gmx:100789568 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01940 06 22390367 22396500 Gma06g01940 06 22390367 22396500 ECH
Gma04g01419 04 33757144 33757662 Gma06g01940 06 22390367 22396500 GST