Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01909 ATGATGGAAGAGAATTCGCGTGGTTGGGACTCAGGAGGAATGGTGTTAGAAACCCTAAGAAAACGAGGTTGGTGTTTGGAAGATACGGACCGATTGAAGGCCATCATCGACATTCAATCCGCACTCGCTGATGACCGTTCCAGATTGGTAGATTCTGTTGAGTCAGAGCTCCTCAATTCCGACCTCAGATCCATCGCCGCCAAGTCCTTGCCCCAACCCTCTCTTCTTCGCAACGCTTCCACTTTCCTTCACGGCCCCAAAGTCCTTCAGATAAGTTCAGTGAGGGACATATCTAAGAGCAGTGTGGATGAGTTTTTGAAAAACTCAGGTGATAGGAGAGTTCTCAGATTGTGTCTCACTGATGGTCACTACGAAATAACTGCTGTGGAATATTCTCACATTCCTTCTATACCCGACAATGTGGTTCCGGGTACTAAGATTCGTTTGGAAAATAAAGTTGCGGTTCACAATGGTATTGTTTGCTTAAATCCTAAAGTATTGACTGTATTAGGAGGTGTTGTTCAATCGCTCTATGAAGAATGGGAGATGAACCAAAAATATTCTGGATTCTCCCGATCATCTTTAAGAAAGCTAGAGAATCGAGATACAGGTGGTCCTCCACAGTTTGTGAAGCTGCAGGTTGGATCTTCTTCAGGTATtgcagattataactctagcagaagccgtaagccagttgctgtggttggtgaagctgagatgagaccaacaagtactgcagattataactctagtagaagtcgtaagccaattgctgtggttggtgaagctgggttgagaccaacTGATTTCCAGCAAGACCCTAATCAGAAAGCAGATGCAAATCTACAATCCAAACCACCTCAAGAAAGAGCTGAAGACAAGGCTAGTAGTAGTTCAGGCACAAGGCCAAAAGAAGTTGTGGAATCTGTTCCTGTTCAAAATCAAGCAGCTGCCCAAAAGTTACTTCAGAAGTTAAATCACCCAAGTCAGAATGATCGACATCATAGGGGTTGGAAACATAGGGGCAAGGGGAAACAAGAAGATCCAGTTGTATTCACTCTGGAAGAATATGAAAACAGAAAGGCCCAGACAAAGCCTTCTATTAAAGACTGGGATCTAGATATCAGTCGTGATGAGCATCTTGCTAGACAGCTTCAAAATCAACTAGACCTTGAAGATTCTCGGGTAGGAAGGGGTACTTATGAAGACAAGGCACAAGATATTAGGATGAGTATGTTCGCATATGAAAGGGATTCTGACAGCAGCCATCAAATggggcaaggaggaaggggaaggggaaggggaagaggaaagggtagaggaagggggagaggaagACATGGTTAA 1347 0.3675 MMEENSRGWDSGGMVLETLRKRGWCLEDTDRLKAIIDIQSALADDRSRLVDSVESELLNSDLRSIAAKSLPQPSLLRNASTFLHGPKVLQISSVRDISKSSVDEFLKNSGDRRVLRLCLTDGHYEITAVEYSHIPSIPDNVVPGTKIRLENKVAVHNGIVCLNPKVLTVLGGVVQSLYEEWEMNQKYSGFSRSSLRKLENRDTGGPPQFVKLQVGSSSGIADYNSSRSRKPVAVVGEAEMRPTSTADYNSSRSRKPIAVVGEAGLRPTDFQQDPNQKADANLQSKPPQERAEDKASSSSGTRPKEVVESVPVQNQAAAQKLLQKLNHPSQNDRHHRGWKHRGKGKQEDPVVFTLEEYENRKAQTKPSIKDWDLDISRDEHLARQLQNQLDLEDSRVGRGTYEDKAQDIRMSMFAYERDSDSSHQMGQGGRGRGRGRGKGRGRGRGRHG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01909 448 MobiDBLite consensus disorder prediction 312 326 - -
Gma06g01909 448 Gene3D - 61 190 IPR042470 -
Gma06g01909 448 PANTHER SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED 15 423 - -
Gma06g01909 448 PANTHER RE01471P 15 423 - -
Gma06g01909 448 MobiDBLite consensus disorder prediction 433 448 - -
Gma06g01909 448 MobiDBLite consensus disorder prediction 267 349 - -
Gma06g01909 448 MobiDBLite consensus disorder prediction 414 448 - -
Gma06g01909 448 MobiDBLite consensus disorder prediction 269 283 - -
Gma06g01909 448 Pfam RecQ mediated genome instability protein 108 183 IPR013894 -
Gma06g01909 448 Pfam RecQ mediated genome instability protein 44 102 IPR013894 -
Gma06g01909 448 SMART DUF1767_2 16 106 IPR033472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01909 Gma-Chr6 21429514 21439042 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01909 K18404 - gmx:100782461 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01909 06 21429514 21439042 Gma06g01909 06 21429514 21439042 ECH
Gma04g01447 04 35649188 35652553 Gma06g01909 06 21429514 21439042 GST