LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma06g01900	ATGGTCGATCACTACAACAAGCTGGTTAAACTAGCGGCGAGGGCTTTCTACGATGATCTAACGAGTAAAGGAGAGAATCAACCCAAATCGGGAAGGAGTGATAACAGAGGAATCGCTGTGGTGATTCTCGACGCTCTCACAAGGCGACAATGGGTCCGAGAAGAAGACTTGGCAAAAGATCTCAAATTACACACAAAACAGCTTCGCCGAACTCTCCGGTTTTTTGAAGAGGAGAAGATCATTACTCGAGAATATAGGAGAGAGACAGCAAAAGGAGCAAAAATGTATAGTGCTGCTACAGCTGCTACAGTTGATGTTCAGCTGACTGGAAAAGAGGGAGAAGAAAAGGTCAAGTTGCACACGCACTCTTACTGTTGTCTAGATTATGCACAGATATATGATGTGGTTAGGTACAGAATACATCGCATGAAAAAGCTGCTGAAAGATGAATTGGACAACAAGAACACAATTGAGGAATATATCTGTACAAAATGTGGAAAAAGATATAATGCTCTGGATGCATTGCGATTAGTATCTTTTGAAGATGATGACTTCCATTGTGAAAGTTGTAATGGAAAACTTGAGGTAGAAAATGACAAATTTGTTGCTCAAGAAGGGGGTGATGGAGATGAAAATGCAAGAAGACGGCGCCATGAAAAGTTAAAAGACATGCTTCAGAAGATGGAGGCACAGCTGAAGCCTTTAATGGACCAACTCAGCCGGGTGAAAGATTTGCCTGTTCCAGAATTTGGCAGTCTTCTAGCATGGGAAGCTCGAGCTAGTGCTATGGGGCGTGCAGCCAACGGAGATATGTCTGGTGATTCTAAAATGTCTCAGCTTGGATATAATGGAGCACCAATGCCTTATAGTGGAGATACTAAGGTTGTGGTGGACTTCAATGGGACTGAAGACATAAAGGATGTTAAGTCTGAAACTGGAAGTGCATCTCTAAAGGTTTTGCCACCATGGATGATTAAATCAGGGATGGTTCTTACAAAGGAACAACGTGGAGAGGCGAAGGAGGAAATAAAGATGGATGGGACTTCAACTTCCTCATCAGCACAGTACTTGGACGACAAGAAATCAACAGTTGACCATGATGATAAGAAAAATATACAGGATGAGTATATTAAAGCTTATTATGCTGCTTTGCTTAAACAACAACATGAATTGGAAGCTGCTAGTAAACAAGAATTGCCAAATACACTCACTGCAAATGATCCTTCTAGCAGTGCTTCTAATCGTCAAGTTGGCATGAAATCAAAACTTGAGGAAGATGATGATGGTACTGAATGGGAGGAGGCTCCAGTTGCAGGTATTGGAAATGAAAATTACAAGGTCGATTTGAATGTTGAAGCTGATGATACTCCAGCTGATGACGATGAAGAAGTGGACTGGGAGGAAGGTTGA	1410	0.4191	MVDHYNKLVKLAARAFYDDLTSKGENQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFEEEKIITREYRRETAKGAKMYSAATAATVDVQLTGKEGEEKVKLHTHSYCCLDYAQIYDVVRYRIHRMKKLLKDELDNKNTIEEYICTKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVENDKFVAQEGGDGDENARRRRHEKLKDMLQKMEAQLKPLMDQLSRVKDLPVPEFGSLLAWEARASAMGRAANGDMSGDSKMSQLGYNGAPMPYSGDTKVVVDFNGTEDIKDVKSETGSASLKVLPPWMIKSGMVLTKEQRGEAKEEIKMDGTSTSSSAQYLDDKKSTVDHDDKKNIQDEYIKAYYAALLKQQHELEAASKQELPNTLTANDPSSSASNRQVGMKSKLEEDDDGTEWEEAPVAGIGNENYKVDLNVEADDTPADDDEEVDWEEG	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma06g01900	469	PANTHER	TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT	8	452	IPR039997	-
	Gma06g01900	469	Coils	Coil	218	238	-	-
	Gma06g01900	469	MobiDBLite	consensus disorder prediction	454	469	-	-
	Gma06g01900	469	MobiDBLite	consensus disorder prediction	400	469	-	-
	Gma06g01900	469	Pfam	TFIIE alpha subunit	39	96	IPR024550	-
	Gma06g01900	469	Coils	Coil	58	78	-	-
	Gma06g01900	469	MobiDBLite	consensus disorder prediction	400	418	-	-
	Gma06g01900	469	SMART	tfiie3	37	208	IPR002853	GO:0006367
	Gma06g01900	469	ProSiteProfiles	TFE/IIEalpha-type HTH domain profile.	5	137	IPR017919	-
	Gma06g01900	469	MobiDBLite	consensus disorder prediction	334	366	-	-
	Gma06g01900	469	SUPERFAMILY	Zinc beta-ribbon	150	198	-	-
	Gma06g01900	469	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	145	206	IPR013083	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma06g01900	Gma-Chr6	21072496	21083018	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma06g01900	K03136		-	gmx:100779773	932.939