Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01856 ATGACAGAGAACAACGAGAATGCTGAAATCCAAATCCGTGCCCTAACCGGCGAATCCATCATTCTTCCCATCACTCCCACCACAACCGTCCAACACCTCAAGCTTCTCCTCAACCGCTCTTTCCCTCCGGCCACCACCTCCCCCAATTTCCACCTCTTTTTCAAGGGAGACAAATTGCGATTGCAGACTCAAATCGGCTCTTTCCCCATCCAACACGGCGAGTTTCTTGTCCTCGTTCCCTTTGCCAAGAAGGAAAAGGAACCTTCTCGAACCCACGAATCGGACACGGTTTCGAATGTTCCAACCTCTACTACTCTCGCGGACTCCACGTGGTCCACCATAAAGGAGGATTTGTCACTTTTACACGACGACGACATCACTGAGAACTGCGACAATGCCTCTAATTCCGAGTCAAAAAAAGAGGAAATGTTGCAGACACAATCCATAGCGGGTTTGGGTTCTGAGAAGCAGATAGAGCTTCCATATCATCTCATATTAGACACATTGCAAGATAGTAGTGAGGGAGTTCTTGGAGAGCATAATTGCGAGGTCTTCGTGAAGGTCTTGGAGTCTGTGAATTGCTTATCGGACCTGCCTCTCGGACACTGCAAGTTGTTGAAACAAGCTTGTGAAAAAAGAGGTGGTGGTGGTGGCTTGAGAAAACGTGTCAGTGATGCTGCTATGTGTATTTGTTCACCGTGGTTGAAGATAGTCGTGAAGGCGTTTGCATTTGTGAACATTTTTTCCACGTTTCTTTATTTGCAGCGTAGGGAATTGACCTTAGTTCTGCTGGAAGAGGCGCTTAGCGAGCTTGCGAAGTTTGGGGTTAAACTTGGCCTTGATGACATAAAGCTTCTTTCGCTACTTTGTCCTCATCTGGTATGTTTTGGAGATGAAGTAGAAAAGACAAACTTTGGTGATGTCATTGTTGTTAACAATGCAACTGGCAATGATGATCAAGTTGAAGACAATCCTAAAAGAGTGCGCAAGTGGTTGTATGTTTCAAAGATTGTCAGTACATTGAAGAGAAGGGATAGCTCTTTCAGAAAAAGTTTAGGATGGGCTTTTGAGCAGCTTCCGTTTGAATTTGGAGATGAGATGACTGTGGGAATTTCCTTGGAAGAGCTGCTTGCAGCTGTCAAGGACCGTGATTTTGTAGGAAAAGAAGACAAATTAAAACGTGTAAAGAGAAGCAAAACTACCTCAAAACCTGGCTTAAACAATATTGGGTGTCATGATACAAAGACATTACTGGCTGTGGACATGGTTGATCATCTTAAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATATTGAAGACATATGTGCCAGAAAAGCAATTTACAGTGAGATCCCAATTGAACTATCAGAGAAAATGAGATCTGTGCTGAAGTGTATTGGAGTTTCCAAATTTTACAGTCACCAGGCAGAGTCTATACAAGCTTCCCTTCATGGCAAAAATGTTGCTGTGGCTACAATGACATCTAGTGGCAAATCCCTTTGCTATAACCTACCAGTTCTAGAAGTGTTGTCCAATAATTCTTCTTCATCTGCTCTGTACATATTTCCCACAAAGGCATTGGCTCAAGATCAACTAAGAGCTTTGTTACACATGACAAAAGGATTAGATATTGACTTAAATATTGGAATATATGATGGGGACACTTCTCACAATGAGAGGATGTGGCTACGTGATAATTCTAGATTGTTGATCACAAATCCAGATATGTTACACATATCAATCTTGCCCCACCATCAACAATTTTGTCGGATTTTATCAAACCTAAGGTTTGTGGTAATTGATGAAACTCATACTTACAAGGGAGCATTTGGATGTCACACTGCACTTATATTGAGGAGGCTAAAACGACTCTGTTCACATGTATATGGATCTGTTCCTTCTTTTGTTTTTTCTACTGCAACTTCTGCAAATCCTCGGCAGCATTCTATGGAACTTGCAAATTTATCTACTCTGGAGCTATTTCAGAATGATGGAAGTCCATCTACAAGGAAACTTTTTGTCCTTTGGAATCCTGCTTTGCGTCCAAAAGCTATCATTAAAAAGACTCAGTTTTCTAAGAGTACTGATGAGCTGGCAGATGAAAGTGCAAATTTTGTTCGCTCAAGCCCGATTGTGGATGTTTCACGCCTTTTTGCAGAAATGGTTCAGCATGGTCTTCGCTGTATTGCATTTTGTAAATCACGGAAACTTTGTGAGCTTGTTTTATCCTATGCACGCGAGATTCTTCATGAGACAGCCCCGCATCTGGTGGATTCCATATGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAAATAGAGAGTTCATTTTTTGGTGGTAAAATATGTGGTGTTGCTGCAACTAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGATGCCACTCTGCATCTAGGATTTCCTGGTAATATTGCAAGCTTGTGGCAACAAGCTGGTAGAGGTGGGAGGAGAGATAGACCATCTCTTGCTGTCTATGTTGCATTTGGTGGGCCTCTTGATCAATACTTCATGAAAAATCCCAAGAAACTCTTTGAAAGACCAATTGAATGTTGCCATGTTGATTCCCAAAACAAGCAGGTTCTTGAACAACATTTGGTCTGCGCAGCTCATGAACACCCTTTGAGTGTGAACTATGATGAGCAATATTTTGGTCCTTGCTTGGAGAGTGTCATAATTTCTCTAAAAGCTAGAGGATACTTGAGTTCTGTTCTATCATCTGATTCTTCTAGAATATGGAACTACATTGGTCCAGAGAAATTACCCTCACACGCAGTCAATATCCGAGCAATTGAAACTTTAAGATATAGTGTCATAGATCAGAAAAAAAATGAAGTTCTTGAAGAGATAGAGGAAAGCAAGGCATTCTTTCAGGTTGTATATGAAGGTGCTGTGTATATGTACCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAACAAAACTGCTTTCTGCAAAGAGGCTGATCTAAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATTGGGGGTAATATTGCTTATCCAGTCAAGGTAGAAACCAACATGTTTCCAAAAACAAATGCCCGGGTTGATGTATGCAAAGTAACAACTACTTGGTTTGGCTTTTATCGTATTTGGAGAGGAAGCAATCAAATCTTTGATGCCGTTGATCTCGCACTTCCTCAATACTCATATGAGTCACAGGCAGTTTGGGTTCCTGTGCCACAGTCAATAAAAGAAGCAGTAAGCAAGCAAAATTATGATTTCCGTGGAGGTCTGCATGCTGCTTCACATGCAATTTTACATGTAGTGCCTTTACATATCACGTGCAACTTGTCTGACTTGGCTCCTGAGTGTCCAAACCCTCATGATAGCCGATATTACCCTGAAAGAATTCTAATATATGATCAACATCATGGAGGGTGTGGAATTTCAGTACAG 3468 0.4135 MTENNENAEIQIRALTGESIILPITPTTTVQHLKLLLNRSFPPATTSPNFHLFFKGDKLRLQTQIGSFPIQHGEFLVLVPFAKKEKEPSRTHESDTVSNVPTSTTLADSTWSTIKEDLSLLHDDDITENCDNASNSESKKEEMLQTQSIAGLGSEKQIELPYHLILDTLQDSSEGVLGEHNCEVFVKVLESVNCLSDLPLGHCKLLKQACEKRGGGGGLRKRVSDAAMCICSPWLKIVVKAFAFVNIFSTFLYLQRRELTLVLLEEALSELAKFGVKLGLDDIKLLSLLCPHLVCFGDEVEKTNFGDVIVVNNATGNDDQVEDNPKRVRKWLYVSKIVSTLKRRDSSFRKSLGWAFEQLPFEFGDEMTVGISLEELLAAVKDRDFVGKEDKLKRVKRSKTTSKPGLNNIGCHDTKTLLAVDMVDHLKKGIGSEGQIVHIEDICARKAIYSEIPIELSEKMRSVLKCIGVSKFYSHQAESIQASLHGKNVAVATMTSSGKSLCYNLPVLEVLSNNSSSSALYIFPTKALAQDQLRALLHMTKGLDIDLNIGIYDGDTSHNERMWLRDNSRLLITNPDMLHISILPHHQQFCRILSNLRFVVIDETHTYKGAFGCHTALILRRLKRLCSHVYGSVPSFVFSTATSANPRQHSMELANLSTLELFQNDGSPSTRKLFVLWNPALRPKAIIKKTQFSKSTDELADESANFVRSSPIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVLSYAREILHETAPHLVDSICAYRGGYIAEERRKIESSFFGGKICGVAATNALELGIDVGEIDATLHLGFPGNIASLWQQAGRGGRRDRPSLAVYVAFGGPLDQYFMKNPKKLFERPIECCHVDSQNKQVLEQHLVCAAHEHPLSVNYDEQYFGPCLESVIISLKARGYLSSVLSSDSSRIWNYIGPEKLPSHAVNIRAIETLRYSVIDQKKNEVLEEIEESKAFFQVVYEGAVYMYQGKTYLVEKLDLSNKTAFCKEADLKYYTKTRDYTDIHVIGGNIAYPVKVETNMFPKTNARVDVCKVTTTWFGFYRIWRGSNQIFDAVDLALPQYSYESQAVWVPVPQSIKEAVSKQNYDFRGGLHAASHAILHVVPLHITCNLSDLAPECPNPHDSRYYPERILIYDQHHGGCGISVQ 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01856 1156 SUPERFAMILY Ubiquitin-like 3 92 IPR029071 -
Gma06g01856 1156 CDD Ubl_ubiquitin_like 10 79 - -
Gma06g01856 1156 CDD SF2_C_Hrq 674 838 - -
Gma06g01856 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 519 847 IPR027417 -
Gma06g01856 1156 Pfam Helicase conserved C-terminal domain 721 827 IPR001650 -
Gma06g01856 1156 Gene3D - 703 884 IPR027417 -
Gma06g01856 1156 SMART ultradead3 468 674 IPR014001 -
Gma06g01856 1156 SMART helicmild6 748 829 IPR001650 -
Gma06g01856 1156 ProSiteProfiles Ubiquitin domain profile. 8 79 IPR000626 GO:0005515
Gma06g01856 1156 CDD DEXHc_Hrq1-like 472 653 - -
Gma06g01856 1156 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 714 870 IPR001650 -
Gma06g01856 1156 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 480 661 IPR014001 -
Gma06g01856 1156 PANTHER ATP-DEPENDENT HELICASE HRQ1 22 1156 - -
Gma06g01856 1156 Pfam DEAD/DEAH box helicase 474 643 IPR011545 GO:0003676|GO:0005524
Gma06g01856 1156 Gene3D - 9 99 - -
Gma06g01856 1156 Gene3D - 444 663 IPR027417 -
Gma06g01856 1156 Pfam MrfA Zn-binding domain 1105 1154 IPR018973 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01856 - - gmx:100819522 2243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01856 06 19980008 19991269 Gma06g01856 06 19980008 19991269 ECH