Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01854 ATGCGGCGGCGCGCCGCCGAGTTTCGGCGCCCGGTTCGGCGGCGGTTCTCCCATTGGATCTGGTTGCTTCTCGGCGCGTTCTCTCTCGCCGGTTTGGTTTTGTTCTTTGTGCAGTACAATCATAGCGAAGATCGGGTCCATCACCCCCTTCTGGAGAGAAATGCTAAAGTTGAACATTTTGCCAAGAGATATAATTTTACTGAGGAAATTTTAAGTGCAACATCCTTTTCACGGCAGTTAGCAGAGCAAATGGTTCTGGCCAAGGCTTATGTGATTATTGCCAAAGAGCACAATAATCTTCACCTTGCCTGGGAGCTTAGCTCAAAGATTAGAAGTTGTCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGGGAGCCTGTGACCATGGAGGAAGCCGAGCCAATTATTAAAAGCTTGTCTTCTCTAATTTTCAAGGCACAAGATGTTCATTATGACATTGCAACCACTATAGCAACAATGAAATCACATATTCAAGCACTTGAAGAGCGTGCAAATACAGCGACAATTCAAAGTACTGTGTTTGCTCAAATATCAGCTGAAGCACTACCCAAGAGTCTTCATTGCTTAAATGTGAAACTTATGGCTGATTGGCTGAAGATGCCATCCCTGCAAAAACTCTCACATGAGAGTAGAATCTCCCCACGGCTCACAGATAATAATCTAAATCATTTCTGCATTTTTTCAGATAATGTACTGGCTACATCTGTAGTTGTTAACTCAACTGTCATGAATGCTGACCATCCAAAACAGTTAGTCTTTCACATTGTTACTGATGGTATCAATTATGGAGCAATGCAAGCATGGTTCTTCAGTAATGACTTTAAAGGGGCTACCTTAGAGaagcctttcatagCAAATGTGACTGCAAGGTATCATTATTGGCAGGAGCAGAATGCTGATGGGACACTCTGGAAACTCGGGTTGGGTTATGACCTAAACATTGACAACCGCCTCATTGAAAGTGCAGCAGTTATTCATTTTAATGGGAACATGAAACCATGGCTGAAGTTAGCTATAGGCAGGTATAAGCCATTATGGCACAAGTACAAAAACCAAAGTCACCCTCATCTACAAGATTGTGCCGCAGGTTAA 1113 0.4277 MRRRAAEFRRPVRRRFSHWIWLLLGAFSLAGLVLFFVQYNHSEDRVHHPLLERNAKVEHFAKRYNFTEEILSATSFSRQLAEQMVLAKAYVIIAKEHNNLHLAWELSSKIRSCQLLLSKAAMTGEPVTMEEAEPIIKSLSSLIFKAQDVHYDIATTIATMKSHIQALEERANTATIQSTVFAQISAEALPKSLHCLNVKLMADWLKMPSLQKLSHESRISPRLTDNNLNHFCIFSDNVLATSVVVNSTVMNADHPKQLVFHIVTDGINYGAMQAWFFSNDFKGATLEKPFIANVTARYHYWQEQNADGTLWKLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWHKYKNQSHPHLQDCAAG 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01854 370 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 313 369 IPR029993 GO:0047262
Gma06g01854 370 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 292 314 IPR029993 GO:0047262
Gma06g01854 370 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 287 IPR029993 GO:0047262
Gma06g01854 370 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 367 IPR029044 -
Gma06g01854 370 Coils Coil 157 177 - -
Gma06g01854 370 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 276 363 IPR029044 -
Gma06g01854 370 PANTHER HEXOSYLTRANSFERASE 313 369 - -
Gma06g01854 370 PANTHER HEXOSYLTRANSFERASE 292 314 - -
Gma06g01854 370 PANTHER HEXOSYLTRANSFERASE 3 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01854 Gma-Chr6 19953846 19957426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01854 293 367 Glycosyltransferase AT2G20810 47.475 9.80e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01854 K13648 - gmx:100817381 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01854 06 19953846 19957426 Gma06g01854 06 19953846 19957426 ECH